fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G46870.1 AGKRLRLFGVDMECG at 240/310 in AT2G46870.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt038767 AGKRLRLFGVNMDCP in 343/413 AT2G46870.1 1st_1st 0.532803180 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G46870.1     MMTDLSLTR---DEDEE-EAKPLAEEE---------------------------------
pt038767_POPTR_ -MNFVEGERGDFDKEEQGEEKQEGEEAVKTSKLLFSSPCTSSSSTKYTNFLPEHHNMWPG
                 *. :.  *   *::*: * *  .**                                  

AT2G46870.1     --------------------------------------------GAREVADREHMFDKVV
pt038767_POPTR_ SFDQSQQDSKTQEPSLNFDKKLELMELSLGNNNETERTSADAVVGARESIEREHMFDKVV
                                                            ****  :*********

AT2G46870.1     TPSDVGKLNRLVIPKQHAERFFPLDSSSNEKGLLLNFEDLTGKSWRFRYSYWNSSQSYVM
pt038767_POPTR_ TPSDVGKLNRLVIPKQHAERYFPLDSSSNEKGLILNFEDRNGKPWRFRYSYWNSSQSYVM
                ********************:************:***** .**.****************

AT2G46870.1     TKGWSRFVKDKKLDAGDIVSFQRCVGDSGRDSRLFIDWRRRPKVPD-----------HPH
pt038767_POPTR_ TKGWSRFVKEKRLDAGDIVSFQRGVGESGK-HRLFIDWRRRPNAPDPTTFSHLELQNQQH
                *********:*:*********** **:**:  **********:.**           : *

AT2G46870.1     FAAGAMFPRFYSFPST------------NYSLYNHQQQRHHHSGGGYNYHQIPREFGYG-
pt038767_POPTR_ YPQSVRWGRLYSIPQSNLSMQQPQLRHLNYSIHPYQQQQYQNRNHQNHYHQ-PSTISYGT
                :. .. : *:**:*.:            ***:: :***:::: .   :*** *  :.** 

AT2G46870.1     ---YFVR-----SVDQRNNPAAAVADPLVIESVPVMMHGRANQELVGTAGKRLRLFGVDM
pt038767_POPTR_ SAQYYLRPPETLQIGAMHQQAGGSHVPLVIDSVPV-VHGK-------TAGKRLRLFGVNM
                   *::*     .:.  :: *..   ****:**** :**:       ***********:*

AT2G46870.1     ECGESGMTNSTEEESSSSGGSLPRGGGGGAS----SSSF---FQLRLGSSSE-DDHFTKK
pt038767_POPTR_ DC-------PTQDDGQSSSITMTHGTMGSFSSHLASSSLPPPLQLRAPTSAPMQAEFSKK
                :*       .*:::..**. ::.:*  *. *    ***:   :***  :*:  : .*:**

AT2G46870.1     GKSSLSFDLDQ
pt038767_POPTR_ GKNSLSFDLDL
                **.*******
BoxShade v3.31 C (beta, 970507) Output
AT2G46870.1     M M T D L S L T R - - - D E D E E - E A K P L A E E E - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt038767_POPTR_    - M N F V E G E R G D F D K E E Q G E E K Q E G E E A V K T S K L L F S S P C T S S S S T K Y T N F L P E H H N M W P G
 
AT2G46870.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - G A R E V A D R E H M F D K V V
pt038767_POPTR_    S F D Q S Q Q D S K T Q E P S L N F D K K L E L M E L S L G N N N E T E R T S A D A V V G A R E S I E R E H M F D K V V
 
AT2G46870.1     T P S D V G K L N R L V I P K Q H A E R F F P L D S S S N E K G L L L N F E D L T G K S W R F R Y S Y W N S S Q S Y V M
pt038767_POPTR_    T P S D V G K L N R L V I P K Q H A E R Y F P L D S S S N E K G L I L N F E D R N G K P W R F R Y S Y W N S S Q S Y V M
 
AT2G46870.1     T K G W S R F V K D K K L D A G D I V S F Q R C V G D S G R D S R L F I D W R R R P K V P D - - - - - - - - - - - H P H
pt038767_POPTR_    T K G W S R F V K E K R L D A G D I V S F Q R G V G E S G K - H R L F I D W R R R P N A P D P T T F S H L E L Q N Q Q H
 
AT2G46870.1     F A A G A M F P R F Y S F P S T - - - - - - - - - - - - N Y S L Y N H Q Q Q R H H H S G G G Y N Y H Q I P R E F G Y G -
pt038767_POPTR_    Y P Q S V R W G R L Y S I P Q S N L S M Q Q P Q L R H L N Y S I H P Y Q Q Q Q Y Q N R N H Q N H Y H Q - P S T I S Y G T
 
AT2G46870.1     - - - Y F V R - - - - - S V D Q R N N P A A A V A D P L V I E S V P V M M H G R A N Q E L V G T A G K R L R L F G V D M
pt038767_POPTR_    S A Q Y Y L R P P E T L Q I G A M H Q Q A G G S H V P L V I D S V P V - V H G K - - - - - - - T A G K R L R L F G V N M
 
AT2G46870.1     E C G E S G M T N S T E E E S S S S G G S L P R G G G G G A S - - - - S S S F - - - F Q L R L G S S S E - D D H F T K K
pt038767_POPTR_    D C - - - - - - - P T Q D D G Q S S S I T M T H G T M G S F S S H L A S S S L P P P L Q L R A P T S A P M Q A E F S K K
 
AT2G46870.1     G K S S L S F D L D Q
pt038767_POPTR_    G K N S L S F D L D L
 
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