fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G46870.1 AGKRLRLFGVDMECG at 240/310 in AT2G46870.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os010946 PSKRVRLFGVNLDCA in 262/311 AT2G46870.1 1st_1st 0.409542743 Ia
GKARCSLNLDL in 306/311
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G46870.1     MMTDLSLTRDEDEEEAKPLAEEEGAREVA--DREHMFDKVVTPSDVGKLNRLVIPKQHAE
Os010946_Os03t0 MEFITPIVRPASAAAGGGEVQESGGRSLAAVEKEHMFDKVVTPSDVGKLNRLVIPKQHAE
                *    .:.*  .   .   .:*.*.*.:*  ::***************************

AT2G46870.1     RFFPLDSSSNEKGLLLNFEDLTGKSWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDIV
Os010946_Os03t0 KYFPLDAASNEKGLLLSFEDRTGKPWRFRYSYWNSSQSYVMTKGWSRFVKEKRLDAGDTV
                ::****::********.*** ***.*************************:*:***** *

AT2G46870.1     SFQRCVGDSGRDSRLFIDWRRRPKV------PDHP---HF--------------------
Os010946_Os03t0 SFGRGVGEAAR-GRLFIDWRRRPDVVAALQPPTHRFAHHLPSSIPFAPWAHHHGHGAAAA
                ** * **::.* .**********.*      * *    *:                    

AT2G46870.1     AAGAMFPRFYSFPSTNYSLYNHQQQRHHHSGGGYN------------YHQIPREFGYGYF
Os010946_Os03t0 AAAAAGARFL-LPPSSTPIYDH-HRRHAHA-VGYDAYAAATSRQVLFYRPLPPQ------
                **.*  .**  :*.:. .:*:* ::** *:  **:            *: :* :      

AT2G46870.1     VRSVDQRNNPAAAVADPLVIESVPVMMHGRANQELVGTAGKRLRLFGVDMECGESGMTNS
Os010946_Os03t0 -----QQHHPA------VVLESVPVRMTA-GHAEPPSAPSKRVRLFGVNLDCA-----NS
                     *:::**      :*:***** * . .: *  .:..**:*****:::*.     **

AT2G46870.1     TEEESSSSGGSLPRGGGGGASSSSFFQLRLGSSSEDDHFTKKGKSSLSFDLDQ
Os010946_Os03t0 EQDHAGVVGKTAPPPLPSPPSSSS-------SSS------GKARCSLNLDL--
                 ::.:.  * : *    . .****       ***       *.:.**.:**
BoxShade v3.31 C (beta, 970507) Output
AT2G46870.1     M M T D L S L T R D E D E E E A K P L A E E E G A R E V A - - D R E H M F D K V V T P S D V G K L N R L V I P K Q H A E
Os010946_Os03t0    M E F I T P I V R P A S A A A G G G E V Q E S G G R S L A A V E K E H M F D K V V T P S D V G K L N R L V I P K Q H A E
 
AT2G46870.1     R F F P L D S S S N E K G L L L N F E D L T G K S W R F R Y S Y W N S S Q S Y V M T K G W S R F V K D K K L D A G D I V
Os010946_Os03t0    K Y F P L D A A S N E K G L L L S F E D R T G K P W R F R Y S Y W N S S Q S Y V M T K G W S R F V K E K R L D A G D T V
 
AT2G46870.1     S F Q R C V G D S G R D S R L F I D W R R R P K V - - - - - - P D H P - - - H F - - - - - - - - - - - - - - - - - - - -
Os010946_Os03t0    S F G R G V G E A A R - G R L F I D W R R R P D V V A A L Q P P T H R F A H H L P S S I P F A P W A H H H G H G A A A A
 
AT2G46870.1     A A G A M F P R F Y S F P S T N Y S L Y N H Q Q Q R H H H S G G G Y N - - - - - - - - - - - - Y H Q I P R E F G Y G Y F
Os010946_Os03t0    A A A A A G A R F L - L P P S S T P I Y D H - H R R H A H A - V G Y D A Y A A A T S R Q V L F Y R P L P P Q - - - - - -
 
AT2G46870.1     V R S V D Q R N N P A A A V A D P L V I E S V P V M M H G R A N Q E L V G T A G K R L R L F G V D M E C G E S G M T N S
Os010946_Os03t0    - - - - - Q Q H H P A - - - - - - V V L E S V P V R M T A - G H A E P P S A P S K R V R L F G V N L D C A - - - - - N S
 
AT2G46870.1     T E E E S S S S G G S L P R G G G G G A S S S S F F Q L R L G S S S E D D H F T K K G K S S L S F D L D Q
Os010946_Os03t0    E Q D H A G V V G K T A P P P L P S P P S S S S - - - - - - - S S S - - - - - - G K A R C S L N L D L - -
 
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