fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G46870.1 AGKRLRLFGVDMECG at 240/310 in AT2G46870.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb022430 ASKRVRLFGVNLDCA in 432/486 AT2G46870.1 1st_1st 0.415506958 Ia
GKARCSLNLDL in 481/486
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (1 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G46870.1     ------------------------MMTDLSLTRDED--------EEEAKPLAEEEGARE-
Sb022430_Sorbi1 SLKGSSSRSEASSIDRPADLPYLPTLADGRTARSRSIAGRRRSMEFTAPPTAARSGGGEE
                                         ::*   :*...        *  * * * ..*. * 

AT2G46870.1     --------------VADREHMFDKVVTPSDVGKLNRLVIPKQHAERFFPLDSSSNEKGLL
Sb022430_Sorbi1 RAAEHQQQQQQQLAAVEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDAAANEKGLL
                              ..::***************************::****:::******

AT2G46870.1     LNFEDLTGKSWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDIVSFQRCVGDSGRDSRL
Sb022430_Sorbi1 LSFEDRTGKPWRFRYSYWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFGRGVGDAAR-GRL
                *.*** ***.*************************:*:***** *** * ***:.* .**

AT2G46870.1     FIDWRRRPKVPDHPHFAAGAMFPRFYSFPSTNYSLYNHQQQRHHH-------------SG
Sb022430_Sorbi1 FIDWRRRPDPPVHHQYHHRLPLPSVVP-----YAPWPHAH--HHHYPAAAAAVGVGVGAG
                ********. * * ::     :* . .     *: : * :  ***             :*

AT2G46870.1     GG-----------------YNYHQIPREFGYGYFVRSVDQ--------RNNPAAAVADPL
Sb022430_Sorbi1 AGAARTTTVLHLPPSPSSLYDPHL--RHVGYDAYGAGTRQLLFYRPLHHQQPSTAV----
                .*                 *: *   *..**. :  .. *        :::*::**    

AT2G46870.1     VIESVPVMMHGRANQE-------LVGTAGKRLRLFGVDMECGESGMTNSTEEESSSSGG-
Sb022430_Sorbi1 VLDSVPVRLPTTPGQHAEPPAPVVASSASKRVRLFGVNLDCAGS------EEENGGGGGW
                *::**** :   ..*.       :..:*.**:*****:::*. *      ***....** 

AT2G46870.1     -----SLPRGGGGGASSSSFFQLRLGSSSEDDHFTKKGKSSLSFDLDQ
Sb022430_Sorbi1 RTSAPPTPHGLPSPPSSSS-------SSS------GKARCSLNLDL--
                     . *:*  . .****       ***       *.:.**.:**
BoxShade v3.31 C (beta, 970507) Output
AT2G46870.1     - - - - - - - - - - - - - - - - - - - - - - - - M M T D L S L T R D E D - - - - - - - - E E E A K P L A E E E G A R E -
Sb022430_Sorbi1    S L K G S S S R S E A S S I D R P A D L P Y L P T L A D G R T A R S R S I A G R R R S M E F T A P P T A A R S G G G E E
 
AT2G46870.1     - - - - - - - - - - - - - - V A D R E H M F D K V V T P S D V G K L N R L V I P K Q H A E R F F P L D S S S N E K G L L
Sb022430_Sorbi1    R A A E H Q Q Q Q Q Q Q L A A V E K E H M F D K V V T P S D V G K L N R L V I P K Q H A E K Y F P L D A A A N E K G L L
 
AT2G46870.1     L N F E D L T G K S W R F R Y S Y W N S S Q S Y V M T K G W S R F V K D K K L D A G D I V S F Q R C V G D S G R D S R L
Sb022430_Sorbi1    L S F E D R T G K P W R F R Y S Y W N S S Q S Y V M T K G W S R F V K E K R L D A G D T V S F G R G V G D A A R - G R L
 
AT2G46870.1     F I D W R R R P K V P D H P H F A A G A M F P R F Y S F P S T N Y S L Y N H Q Q Q R H H H - - - - - - - - - - - - - S G
Sb022430_Sorbi1    F I D W R R R P D P P V H H Q Y H H R L P L P S V V P - - - - - Y A P W P H A H - - H H H Y P A A A A A V G V G V G A G
 
AT2G46870.1     G G - - - - - - - - - - - - - - - - - Y N Y H Q I P R E F G Y G Y F V R S V D Q - - - - - - - - R N N P A A A V A D P L
Sb022430_Sorbi1    A G A A R T T T V L H L P P S P S S L Y D P H L - - R H V G Y D A Y G A G T R Q L L F Y R P L H H Q Q P S T A V - - - -
 
AT2G46870.1     V I E S V P V M M H G R A N Q E - - - - - - - L V G T A G K R L R L F G V D M E C G E S G M T N S T E E E S S S S G G -
Sb022430_Sorbi1    V L D S V P V R L P T T P G Q H A E P P A P V V A S S A S K R V R L F G V N L D C A G S - - - - - - E E E N G G G G G W
 
AT2G46870.1     - - - - - S L P R G G G G G A S S S S F F Q L R L G S S S E D D H F T K K G K S S L S F D L D Q
Sb022430_Sorbi1    R T S A P P T P H G L P S P P S S S S - - - - - - - S S S - - - - - - G K A R C S L N L D L - -
 
0