fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G46990.1 RNLSTDLRLGLSFGTS at 32/175 in AT2G46990.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm002637 DHLRTDLRLGLSISTT in 40/180 AT3G62100.1 not_not 0.424561403 III
Gm035692 TDLSTDLRLGLSISPS in 103/244 AT3G17600.1 not_not 0.414035087 III
Gm045965 TDLSTDLRLGLSISPS in 119/260 AT3G17600.1 not_not 0.414035087 III
Gm027578 not found in 115aa AT3G62100.1 not_not 0.403508771 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT2G46990.1     ------------------------------------------------------------
gm045965_Glyma1 MSPTLMANQNQRECAECLTWLCFLLITLSLSFFLFCFKVASVVCIYKEPKVAAFLFSLDQ
gm002637_Glyma0 ------------------------------------------------------------
gm035692_Glyma1 MSDLAL----------------LLLIILSLSFFLFWYKVASVVYIYKDPKVAVFLFSLDQ
gm027578_Glyma1 ------------------------------------------------------------
                                                                            

AT2G46990.1     ------MG----------RGRSSSSSSIES-SSKS---NPFGASSSTR------NLSTDL
gm045965_Glyma1 FHSLEDMGTLEQIDAPQTQSSSSSSSSIDSNNNPSRTRTPPSSSPSSSLCRNRTDLSTDL
gm002637_Glyma0 ------MG----------KASSSSSSSISSCRNPS---NYSTASSLTHQHSDQDHLRTDL
gm035692_Glyma1 FHSLEDMGTLEQIDAPQTRSSSSSSSSIDSNNHPSRTRTPPPSSPSSSACRNRTDLSTDL
gm027578_Glyma1 ------------------------------------------------------------
                                                                            

AT2G46990.1     RLGLSF--------GTSSGTQYFNGGYGYSVAAPAVEDAEYVAAVEEEEENECNSVGSFY
gm045965_Glyma1 RLGLSISP------SSQSESPFNSTRREESFDWPPIKS--ILRSTLVGKQSYLSQRPSLF
gm002637_Glyma0 RLGLSISTTHDQHVGSSS-----SGGH-WQPMQPHL-----SSFSQATEVNHCSDHTSFF
gm035692_Glyma1 RLGLSISP------SSQSELPFNSTPREESFDWPPIKS--ILRSTLVGKQSHLSQRPSLF
gm027578_Glyma1 -------------------------------MQPHL----ISSFSQATEVNDCSDHTSFF
                                                 * :            : .  ..  *::

AT2G46990.1     VKVNMEGVPIGRKIDLMSLNGYRDLIRTLDFMFNASILWAEEEDMCN-EKSHVLTYADKE
gm045965_Glyma1 VKVYMEGIPIGRKLNLMAHYGYDGLVKTLGHMFRTNILCPNSQPLNS-GNFHVLTYEDQE
gm002637_Glyma0 VKVYMEGIPIGRKLNLLAHDGYHELVKTLEQMFDTTILWGTEMDGVQPDRCHVLTYEDGE
gm035692_Glyma1 VKVYMEGIPIGRKLNLMAHYSYDGLVKTLGHMFRTNILCPNSQPLNS-RNFHVLTYEDQE
gm027578_Glyma1 VKVYMEGIPIGRKLNLLAHDGYHELVKTLEQMFDTTILWGTEMDGVQPERCHVLTYEDGE
                *** ***:*****::*::  .*  *::**  ** :.**   .    .  . ***** * *

AT2G46990.1     GDWMMVGDVPWEMFLSTVRRLKISRANYHY
gm045965_Glyma1 GDWMMVGDVPWEMFLNSVKRLKITRADRC-
gm002637_Glyma0 GDLIMVGDVPWEMFLSAVKRLKITRVETFG
gm035692_Glyma1 GDWMMVGDVPWEMFLNSVKRLKITRADRC-
gm027578_Glyma1 GDLIMVGDVPWEMFLSAVKRLKITRVEAFG
                ** :***********.:*:****:*.:
BoxShade v3.31 C (beta, 970507) Output
AT2G46990.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm045965_Glyma1    M S P T L M A N Q N Q R E C A E C L T W L C F L L I T L S L S F F L F C F K V A S V V C I Y K E P K V A A F L F S L D Q
gm002637_Glyma0    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm035692_Glyma1    M S D L A L - - - - - - - - - - - - - - - - L L L I I L S L S F F L F W Y K V A S V V Y I Y K D P K V A V F L F S L D Q
gm027578_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT2G46990.1     - - - - - - M G - - - - - - - - - - R G R S S S S S S I E S - S S K S - - - N P F G A S S S T R - - - - - - N L S T D L
gm045965_Glyma1    F H S L E D M G T L E Q I D A P Q T Q S S S S S S S S I D S N N N P S R T R T P P S S S P S S S L C R N R T D L S T D L
gm002637_Glyma0    - - - - - - M G - - - - - - - - - - K A S S S S S S S I S S C R N P S - - - N Y S T A S S L T H Q H S D Q D H L R T D L
gm035692_Glyma1    F H S L E D M G T L E Q I D A P Q T R S S S S S S S S I D S N N H P S R T R T P P P S S P S S S A C R N R T D L S T D L
gm027578_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT2G46990.1     R L G L S F - - - - - - - - G T S S G T Q Y F N G G Y G Y S V A A P A V E D A E Y V A A V E E E E E N E C N S V G S F Y
gm045965_Glyma1    R L G L S I S P - - - - - - S S Q S E S P F N S T R R E E S F D W P P I K S - - I L R S T L V G K Q S Y L S Q R P S L F
gm002637_Glyma0    R L G L S I S T T H D Q H V G S S S - - - - - S G G H - W Q P M Q P H L - - - - - S S F S Q A T E V N H C S D H T S F F
gm035692_Glyma1    R L G L S I S P - - - - - - S S Q S E L P F N S T P R E E S F D W P P I K S - - I L R S T L V G K Q S H L S Q R P S L F
gm027578_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M Q P H L - - - - I S S F S Q A T E V N D C S D H T S F F
 
AT2G46990.1     V K V N M E G V P I G R K I D L M S L N G Y R D L I R T L D F M F N A S I L W A E E E D M C N - E K S H V L T Y A D K E
gm045965_Glyma1    V K V Y M E G I P I G R K L N L M A H Y G Y D G L V K T L G H M F R T N I L C P N S Q P L N S - G N F H V L T Y E D Q E
gm002637_Glyma0    V K V Y M E G I P I G R K L N L L A H D G Y H E L V K T L E Q M F D T T I L W G T E M D G V Q P D R C H V L T Y E D G E
gm035692_Glyma1    V K V Y M E G I P I G R K L N L M A H Y S Y D G L V K T L G H M F R T N I L C P N S Q P L N S - R N F H V L T Y E D Q E
gm027578_Glyma1    V K V Y M E G I P I G R K L N L L A H D G Y H E L V K T L E Q M F D T T I L W G T E M D G V Q P E R C H V L T Y E D G E
 
AT2G46990.1     G D W M M V G D V P W E M F L S T V R R L K I S R A N Y H Y
gm045965_Glyma1    G D W M M V G D V P W E M F L N S V K R L K I T R A D R C -
gm002637_Glyma0    G D L I M V G D V P W E M F L S A V K R L K I T R V E T F G
gm035692_Glyma1    G D W M M V G D V P W E M F L N S V K R L K I T R A D R C -
gm027578_Glyma1    G D L I M V G D V P W E M F L S A V K R L K I T R V E A F G
 
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