fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G47090.1 SMAAVLDLRNSNPEPEPE at 722/766 in AT2G47090.1
SMAAVLDLRNSNPEPEPE at 699/743 in AT2G47090.2
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt017815 SMAALLDLQSSDPDPHNT in 772/812 AT3G62240.1 1st_not 0.445494186 II
Pt039819 SMAALLDLQNSEPDPRET in 776/819 AT3G62240.1 not_not 0.444767441 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT2G47090.1     MDDSCAVCAENLEWVGYGSCGHREVCSTCVVRLRFILNDRRCCICKTECPVVFVTKALGD
pt039819_POPTR_ MDDSCAVCAEALEWVAYGACGHLDVCSTCVSRLRFICDDRRCCICKTESSVVFVTKALGD
pt017815_POPTR_ MDDSCAVCAEVLEWVAYGACGHREVCSTCVARLRFICDDRRCCICKTESSVVFVTKALGD
                ********** ****.**:*** :****** ***** :**********..**********

AT2G47090.1     YTKTISDFSTTFPSVPKEGRVGSFWYHEETNVYFDDLNHYTRIKAMCRLSCNLC-----N
pt039819_POPTR_ YTRMINDFL-LLPSEPKEGRMGSYWYHEDTQAFFDDVDHYKMIKAMCRLSCSVCDKEESN
pt017815_POPTR_ YTRLINDFS-VLPSEPKEGRIGSYWYHEDTQAFFDDVDHYKMIKAMCKLSCSLCDKEESN
                **: *.**   :** *****:**:****:*:.:***::**. *****:***.:*     *

AT2G47090.1     DTNKTRPKKEPNHCVRFKSVEHLKDHLNHQHKLHMCSLCLVGRKVFICEQKLFTKGQLNQ
pt039819_POPTR_ DGSKRRGK--------FRNINQLKGHLFHQHKLHMCSLCLEGRKVFICEQKLYTRAQLNQ
pt017815_POPTR_ DGSKRRGK--------FRNINQLKGHLFHQHKLHMCSLCLEGRKVFLCEQKLYARAQLNQ
                * .* * *        *:.:::**.** ************ *****:*****:::.****

AT2G47090.1     HISSGDSEVDGSESERGGFTGHPMCEFCKRPFYGDNELYTHMSREHYTCHICQRLKPGQY
pt039819_POPTR_ HISTGDSDVDGSESERGGFMGHPMCEFCKKPFYGDNELYKHMSTEHYTCHLCQRQHPGQY
pt017815_POPTR_ HISTGDSEVDGSESERGGFMGHPMCEFCKKPFYGDNELYTHMSTEHYTCHLCLRQHPGQY
                ***:***:*********** *********:*********.*** ******:* * :****

AT2G47090.1     EYYGNYDDLEVHFRSDHFLCEDETCLAKKFIVFQIEAELKRHNAIDHGGRMSRSQQNASL
pt039819_POPTR_ EYYKNYDDLEIHFRRDHFLCDDEGCLAKKFIVFQTEAELKRHNTIEHAGHMSRSQRNAAL
pt017815_POPTR_ EYYKNYDDLEIHFCRDHFLCDDEECLAKKFIVFQTEAELKRHNTIEHAGHMSRSQRNAAL
                *** ******:**  *****:** ********** ********:*:*.*:*****:**:*

AT2G47090.1     QIQASFQYPNS-----RRGRRRSSLREP--NLVLLESQASY-----------------AF
pt039819_POPTR_ QIPTSFRYRRSNEQDNRHGRGRTFRRDQSDNQLSIAIQASLEAAYSESTSRDRSSSAQAI
pt017815_POPTR_ QIPTSFRYRRSNEQDNRRGRGRTFCRDQSDNQLSIVIQASLETAHSESTSRDRSARAQVI
                ** :**:* .*     *:** *:  *:   * : :  ***                  .:

AT2G47090.1     NDDNNL-----------------PQHVGR--------SGNSRLGESSFPPLSVQANQGQS
pt039819_POPTR_ SDHVDLSDIDPIVQPFESLSATDPETTLRYLQALGPSSRNAPLQESSFPPLF--------
pt017815_POPTR_ SDHVDSNDIDAIVQPFESLTATDPETTSRYLQALGHSSSNATLQESSFPPLF--------
                .*. :                  *: . *        * *: * *******         

AT2G47090.1     RFGQNSESLVSNTTTTRQRHRANQGQSRFGQNSESLVSNTTTTRQRHQTNRSAT-SGSSQ
pt039819_POPTR_ ------------TTTS-------SGQQKAKDESESLPNNTMATHLRRQNNRNATVVNSPQ
pt017815_POPTR_ ------------TIPT-------SGQQSSKDESEGLPNNTMAAHLRRQANRNATLINSPQ
                            * .:       .**.   ::**.* .** ::: *:* **.**  .*.*

AT2G47090.1     AWPALNRGPAEIS------------ITSRVQSSGASAQSQSRHHDRVESTRTLASAVPQD
pt039819_POPTR_ QWPAASRGHVSSSPALYRPTVDTSPLSSRSSASGPGLSSYA------SSIQSHAQTRPAA
pt017815_POPTR_ QWPTASHGHVSSSSALYRPTLNALPLSSRSSAGGPGLSSYA------SSIQAQSQARPLV
                 **: .:* .. *            ::** .:.*.. .* :      .* :: :.: *  

AT2G47090.1     ARTTVGGCSSGSSLSSANATKRNNHHSSSTPKMSETRSLAQPSHSDSPQISAVKNRRSSS
pt039819_POPTR_ VR----GHPSAGSVGISGTTSRIS-STASASNLADSGSL-KPSVSDFPPVSAVPMHKMPT
pt017815_POPTR_ VR----GHLPAGLLGSSGSTGRMS-HSSSAPNLAETGSL-KPSISDFPPVSAVQMHKMPS
                .*    *  ... :. :.:* * .  ::*:.::::: ** :** ** * :***  :: .:

AT2G47090.1     TSANAGNIQVAQGVSDVQSDNKSLVEKIHASLGHDEELFMAFKNTSGKYRHGSIDARTYL
pt039819_POPTR_ SS------QVVLNVEEFQTANKSLVEKIRAALENDEDRYTLFKDISGQYRQGSIDTGEYL
pt017815_POPTR_ SN------QGVLNVEDVQTANKSLVERIRAALENDEDRYALFKDISGQYRQGSIGTGEYL
                :.      * . .*.:.*: ******:*:*:* :**: :  **: **:**:***.:  **

AT2G47090.1     EYVKGYGLSHLVLDMARLCPDPQRQKELIDTHNAC-----------------LKG---GN
pt039819_POPTR_ DYVQQFGLSRLIPELARLCPDAQKQKELVETYNASLRSSGKKENGWGRGSAQLKG-TNGS
pt017815_POPTR_ DYVQQFGLSHLIPELARLCPDAQKQKELVDTYNASLRSNGKKENGWGRGSTHLKGTTNGS
                :**: :***:*: ::******.*:****::*:**.                 ***   *.

AT2G47090.1     ----KGKAVKVESSSDSKGDRFVDTVRKLQFSDKSQDKDKD---KDAYRSDKGKTKVT--
pt039819_POPTR_ -KEGKGIAENDSSSKDRLTDSFINTVRALQSNYKPVEDEAQLLSKDGYRAAKGKSNVMLD
pt017815_POPTR_ TKKGKGIAVEDSSSKDRLADSFINSVRALQSNYKPVEEEVQ-LSKDGYRTAKGKSNVIHN
                    ** * : .**.*   * *:::** ** . *. :.: :   **.**: ***::*   

AT2G47090.1     -----------TL--VNSSSAGVGLGDTGKQPKKTSKFLRTRLGEKSMAAVLDLRNSNPE
pt039819_POPTR_ ERQMEPRIQNGSLSAGDGSSKNLKDGGTEKQRKKTSKVHRARLGDGSMAALLDLQNSEPD
pt017815_POPTR_ ELQMEPRIQNDSL-----SSKNIKDGGNEKQRKKTSKFHRVRLGDGSMAALLDLQSSDPD
                           :*     ** .:  *.. ** *****. *.***: ****:***:.*:*:

AT2G47090.1     PEPEPKN---DNSKRSQNSPGGLPLRGAWKRGSA-KLFV
pt039819_POPTR_ PRETVENRIDDSS----NSVGGLPVRGVWRKGGGQKLFP
pt017815_POPTR_ PHNTGENRIDDNG----NSG---PVRGVWRKGGGQKLFS
                *.   :*   *..    **    *:**.*::*.. ***
BoxShade v3.31 C (beta, 970507) Output
AT2G47090.1     M D D S C A V C A E N L E W V G Y G S C G H R E V C S T C V V R L R F I L N D R R C C I C K T E C P V V F V T K A L G D
pt039819_POPTR_    M D D S C A V C A E A L E W V A Y G A C G H L D V C S T C V S R L R F I C D D R R C C I C K T E S S V V F V T K A L G D
pt017815_POPTR_    M D D S C A V C A E V L E W V A Y G A C G H R E V C S T C V A R L R F I C D D R R C C I C K T E S S V V F V T K A L G D
 
AT2G47090.1     Y T K T I S D F S T T F P S V P K E G R V G S F W Y H E E T N V Y F D D L N H Y T R I K A M C R L S C N L C - - - - - N
pt039819_POPTR_    Y T R M I N D F L - L L P S E P K E G R M G S Y W Y H E D T Q A F F D D V D H Y K M I K A M C R L S C S V C D K E E S N
pt017815_POPTR_    Y T R L I N D F S - V L P S E P K E G R I G S Y W Y H E D T Q A F F D D V D H Y K M I K A M C K L S C S L C D K E E S N
 
AT2G47090.1     D T N K T R P K K E P N H C V R F K S V E H L K D H L N H Q H K L H M C S L C L V G R K V F I C E Q K L F T K G Q L N Q
pt039819_POPTR_    D G S K R R G K - - - - - - - - F R N I N Q L K G H L F H Q H K L H M C S L C L E G R K V F I C E Q K L Y T R A Q L N Q
pt017815_POPTR_    D G S K R R G K - - - - - - - - F R N I N Q L K G H L F H Q H K L H M C S L C L E G R K V F L C E Q K L Y A R A Q L N Q
 
AT2G47090.1     H I S S G D S E V D G S E S E R G G F T G H P M C E F C K R P F Y G D N E L Y T H M S R E H Y T C H I C Q R L K P G Q Y
pt039819_POPTR_    H I S T G D S D V D G S E S E R G G F M G H P M C E F C K K P F Y G D N E L Y K H M S T E H Y T C H L C Q R Q H P G Q Y
pt017815_POPTR_    H I S T G D S E V D G S E S E R G G F M G H P M C E F C K K P F Y G D N E L Y T H M S T E H Y T C H L C L R Q H P G Q Y
 
AT2G47090.1     E Y Y G N Y D D L E V H F R S D H F L C E D E T C L A K K F I V F Q I E A E L K R H N A I D H G G R M S R S Q Q N A S L
pt039819_POPTR_    E Y Y K N Y D D L E I H F R R D H F L C D D E G C L A K K F I V F Q T E A E L K R H N T I E H A G H M S R S Q R N A A L
pt017815_POPTR_    E Y Y K N Y D D L E I H F C R D H F L C D D E E C L A K K F I V F Q T E A E L K R H N T I E H A G H M S R S Q R N A A L
 
AT2G47090.1     Q I Q A S F Q Y P N S - - - - - R R G R R R S S L R E P - - N L V L L E S Q A S Y - - - - - - - - - - - - - - - - - A F
pt039819_POPTR_    Q I P T S F R Y R R S N E Q D N R H G R G R T F R R D Q S D N Q L S I A I Q A S L E A A Y S E S T S R D R S S S A Q A I
pt017815_POPTR_    Q I P T S F R Y R R S N E Q D N R R G R G R T F C R D Q S D N Q L S I V I Q A S L E T A H S E S T S R D R S A R A Q V I
 
AT2G47090.1     N D D N N L - - - - - - - - - - - - - - - - - P Q H V G R - - - - - - - - S G N S R L G E S S F P P L S V Q A N Q G Q S
pt039819_POPTR_    S D H V D L S D I D P I V Q P F E S L S A T D P E T T L R Y L Q A L G P S S R N A P L Q E S S F P P L F - - - - - - - -
pt017815_POPTR_    S D H V D S N D I D A I V Q P F E S L T A T D P E T T S R Y L Q A L G H S S S N A T L Q E S S F P P L F - - - - - - - -
 
AT2G47090.1     R F G Q N S E S L V S N T T T T R Q R H R A N Q G Q S R F G Q N S E S L V S N T T T T R Q R H Q T N R S A T - S G S S Q
pt039819_POPTR_    - - - - - - - - - - - - T T T S - - - - - - - S G Q Q K A K D E S E S L P N N T M A T H L R R Q N N R N A T V V N S P Q
pt017815_POPTR_    - - - - - - - - - - - - T I P T - - - - - - - S G Q Q S S K D E S E G L P N N T M A A H L R R Q A N R N A T L I N S P Q
 
AT2G47090.1     A W P A L N R G P A E I S - - - - - - - - - - - - I T S R V Q S S G A S A Q S Q S R H H D R V E S T R T L A S A V P Q D
pt039819_POPTR_    Q W P A A S R G H V S S S P A L Y R P T V D T S P L S S R S S A S G P G L S S Y A - - - - - - S S I Q S H A Q T R P A A
pt017815_POPTR_    Q W P T A S H G H V S S S S A L Y R P T L N A L P L S S R S S A G G P G L S S Y A - - - - - - S S I Q A Q S Q A R P L V
 
AT2G47090.1     A R T T V G G C S S G S S L S S A N A T K R N N H H S S S T P K M S E T R S L A Q P S H S D S P Q I S A V K N R R S S S
pt039819_POPTR_    V R - - - - G H P S A G S V G I S G T T S R I S - S T A S A S N L A D S G S L - K P S V S D F P P V S A V P M H K M P T
pt017815_POPTR_    V R - - - - G H L P A G L L G S S G S T G R M S - H S S S A P N L A E T G S L - K P S I S D F P P V S A V Q M H K M P S
 
AT2G47090.1     T S A N A G N I Q V A Q G V S D V Q S D N K S L V E K I H A S L G H D E E L F M A F K N T S G K Y R H G S I D A R T Y L
pt039819_POPTR_    S S - - - - - - Q V V L N V E E F Q T A N K S L V E K I R A A L E N D E D R Y T L F K D I S G Q Y R Q G S I D T G E Y L
pt017815_POPTR_    S N - - - - - - Q G V L N V E D V Q T A N K S L V E R I R A A L E N D E D R Y A L F K D I S G Q Y R Q G S I G T G E Y L
 
AT2G47090.1     E Y V K G Y G L S H L V L D M A R L C P D P Q R Q K E L I D T H N A C - - - - - - - - - - - - - - - - - L K G - - - G N
pt039819_POPTR_    D Y V Q Q F G L S R L I P E L A R L C P D A Q K Q K E L V E T Y N A S L R S S G K K E N G W G R G S A Q L K G - T N G S
pt017815_POPTR_    D Y V Q Q F G L S H L I P E L A R L C P D A Q K Q K E L V D T Y N A S L R S N G K K E N G W G R G S T H L K G T T N G S
 
AT2G47090.1     - - - - K G K A V K V E S S S D S K G D R F V D T V R K L Q F S D K S Q D K D K D - - - K D A Y R S D K G K T K V T - -
pt039819_POPTR_    - K E G K G I A E N D S S S K D R L T D S F I N T V R A L Q S N Y K P V E D E A Q L L S K D G Y R A A K G K S N V M L D
pt017815_POPTR_    T K K G K G I A V E D S S S K D R L A D S F I N S V R A L Q S N Y K P V E E E V Q - L S K D G Y R T A K G K S N V I H N
 
AT2G47090.1     - - - - - - - - - - - T L - - V N S S S A G V G L G D T G K Q P K K T S K F L R T R L G E K S M A A V L D L R N S N P E
pt039819_POPTR_    E R Q M E P R I Q N G S L S A G D G S S K N L K D G G T E K Q R K K T S K V H R A R L G D G S M A A L L D L Q N S E P D
pt017815_POPTR_    E L Q M E P R I Q N D S L - - - - - S S K N I K D G G N E K Q R K K T S K F H R V R L G D G S M A A L L D L Q S S D P D
 
AT2G47090.1     P E P E P K N - - - D N S K R S Q N S P G G L P L R G A W K R G S A - K L F V
pt039819_POPTR_    P R E T V E N R I D D S S - - - - N S V G G L P V R G V W R K G G G Q K L F P
pt017815_POPTR_    P H N T G E N R I D D N G - - - - N S G - - - P V R G V W R K G G G Q K L F S
 
0