fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G47190.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb017917 not found in 341aa AT3G06490.1 1st_not 0.405498281 II
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G47190.1     ------------MEDYERINSNSPTHEEDS-------------------------DVRKG
Sb017917_Sorbi1 MDDMDMAMAMVSFDDLDQVLAMSPSSSATSSAPVAAAQPAAAGSSSDDEAAAICADLRRG
                            ::* ::: : **: .  *                         *:*:*

AT2G47190.1     PWTEEEDAILVNFVSIHGDARWNHIARSSGLKRTGKSCRLRWLNYLRPDVRRGNITLEEQ
Sb017917_Sorbi1 PWTADEDILLVNYIAVHGEGRWNSLARSAGLKRTGKSCRLRWLNYLRPDVRRGNITAEEQ
                *** :** :***::::**:.*** :***:*************************** ***

AT2G47190.1     FMILKLHSLWGNRWSKIAQYLPGRTDNEIKNYWRTRVQKQAKHLRCDVNSNLFKETMRNV
Sb017917_Sorbi1 LLILDLHSRWGNRWSKIAQHLPGRTDNEIKNYWRTRVQKHARHLRCDVNSASFRHVVRHV
                ::**.*** **********:*******************:*:********  *:..:*:*

AT2G47190.1     WMPRLVERINAQS--------------------LPTTCEQVESMIT-----------DPS
Sb017917_Sorbi1 WMPRLRERVQAAAGRDAGEGCGGGVQSPAAAPLVPVVVEAPAATTTASAPSACYDYYDAS
                ***** **::* :                    :*.. *   :  *           *.*

AT2G47190.1     QPVNEPSPVEPGFVQFSQNHHQQFVPATELSATSSNS-----PAETFSDVRGG-----VV
Sb017917_Sorbi1 SALRRPSSSTLTADDTSHDYAGVYAYTSAAAATPTNDNQGCRQMTTDDDVFAGTALSELL
                ..:..**.      : *:::   :. ::  :**.:*.        * .** .*     ::

AT2G47190.1     NGSGYDPSGQT---------GFGEFNDWGCVGGDNMWTDEESFWFLQD----QFCPDTTS
Sb017917_Sorbi1 ATSGRDDDSSSASMIGLPEFGFGDL--------------EDGLWSLDDLCLQQLC-----
                  ** * ...:         ***::              *:.:* *:*    *:*     

AT2G47190.1     YSYN
Sb017917_Sorbi1 ----
BoxShade v3.31 C (beta, 970507) Output
AT2G47190.1     - - - - - - - - - - - - M E D Y E R I N S N S P T H E E D S - - - - - - - - - - - - - - - - - - - - - - - - - D V R K G
Sb017917_Sorbi1    M D D M D M A M A M V S F D D L D Q V L A M S P S S S A T S S A P V A A A Q P A A A G S S S D D E A A A I C A D L R R G
 
AT2G47190.1     P W T E E E D A I L V N F V S I H G D A R W N H I A R S S G L K R T G K S C R L R W L N Y L R P D V R R G N I T L E E Q
Sb017917_Sorbi1    P W T A D E D I L L V N Y I A V H G E G R W N S L A R S A G L K R T G K S C R L R W L N Y L R P D V R R G N I T A E E Q
 
AT2G47190.1     F M I L K L H S L W G N R W S K I A Q Y L P G R T D N E I K N Y W R T R V Q K Q A K H L R C D V N S N L F K E T M R N V
Sb017917_Sorbi1    L L I L D L H S R W G N R W S K I A Q H L P G R T D N E I K N Y W R T R V Q K H A R H L R C D V N S A S F R H V V R H V
 
AT2G47190.1     W M P R L V E R I N A Q S - - - - - - - - - - - - - - - - - - - - L P T T C E Q V E S M I T - - - - - - - - - - - D P S
Sb017917_Sorbi1    W M P R L R E R V Q A A A G R D A G E G C G G G V Q S P A A A P L V P V V V E A P A A T T T A S A P S A C Y D Y Y D A S
 
AT2G47190.1     Q P V N E P S P V E P G F V Q F S Q N H H Q Q F V P A T E L S A T S S N S - - - - - P A E T F S D V R G G - - - - - V V
Sb017917_Sorbi1    S A L R R P S S S T L T A D D T S H D Y A G V Y A Y T S A A A A T P T N D N Q G C R Q M T T D D D V F A G T A L S E L L
 
AT2G47190.1     N G S G Y D P S G Q T - - - - - - - - - G F G E F N D W G C V G G D N M W T D E E S F W F L Q D - - - - Q F C P D T T S
Sb017917_Sorbi1    A T S G R D D D S S S A S M I G L P E F G F G D L - - - - - - - - - - - - - - E D G L W S L D D L C L Q Q L C - - - - -
 
AT2G47190.1     Y S Y N
Sb017917_Sorbi1    - - - -
 
0