fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G47190.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm026431 not found in 282aa AT5G49620.1 1st_not 0.417525773 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G47190.1     -----------MEDYERINSNSPTHEEDSDVRKGPWTEEEDAILVNFVSIHGDARWNHIA
gm026431_Glyma1 MDTISVQAMRSLSDSDSLSSATYASEEDMKIKKGPWTEEEDSVLINYVNFQGEGQWNSLA
                           :.* : :.* : : *** .::*********::*:*:*.::*:.:** :*

AT2G47190.1     RSSGLKRTGKSCRLRWLNYLRPDVRRGNITLEEQFMILKLHSLWGNRWSKIAQYLPGRTD
gm026431_Glyma1 RSAGLKRTGKSCRLRWLNYLRPNVRRGNITLQEQLLILELHSRWGNRWAKIAEELGGRTD
                **:*******************:********:**::**:*** *****:***: * ****

AT2G47190.1     NEIKNYWRTRVQKQAKHLRCDVNSNLFKETMRNVWMPRLVERINA--------------Q
gm026431_Glyma1 NEIKNYWRTRVVKQAKQLKCDVNSKQFRDTVRFVWMPRLMEQIQASFRIVPSDSSHGLDQ
                *********** ****:*:*****: *::*:* ******:*:*:*              *

AT2G47190.1     SLPTTCEQVES-------MITDPSQPVNEPSPVEPGFVQFSQNHHQQFVPATELSATSSN
gm026431_Glyma1 TTLCNTQQTESSTDANPTMFCDNSMVSSYSSEVD-----------LQPLSLSDTSTTSSS
                :   . :*.**       *: * *   . .* *:            * :. :: *:***.

AT2G47190.1     SPAET-------------FSDVRGGVVNGSGYDPSGQTGFGEFNDWGCVGGDNMWTDEES
gm026431_Glyma1 ESAEKKESISSSLWQQWDYSDLQ-------AFEPC--NGFGD---------ADLWTD-EN
                ..**.             :**::       .::*.  .***:          ::*** *.

AT2G47190.1     FWFLQDQFCPDTTSYSYN
gm026431_Glyma1 IWFLQQHLADHL------
                :****:::. .
BoxShade v3.31 C (beta, 970507) Output
AT2G47190.1     - - - - - - - - - - - M E D Y E R I N S N S P T H E E D S D V R K G P W T E E E D A I L V N F V S I H G D A R W N H I A
gm026431_Glyma1    M D T I S V Q A M R S L S D S D S L S S A T Y A S E E D M K I K K G P W T E E E D S V L I N Y V N F Q G E G Q W N S L A
 
AT2G47190.1     R S S G L K R T G K S C R L R W L N Y L R P D V R R G N I T L E E Q F M I L K L H S L W G N R W S K I A Q Y L P G R T D
gm026431_Glyma1    R S A G L K R T G K S C R L R W L N Y L R P N V R R G N I T L Q E Q L L I L E L H S R W G N R W A K I A E E L G G R T D
 
AT2G47190.1     N E I K N Y W R T R V Q K Q A K H L R C D V N S N L F K E T M R N V W M P R L V E R I N A - - - - - - - - - - - - - - Q
gm026431_Glyma1    N E I K N Y W R T R V V K Q A K Q L K C D V N S K Q F R D T V R F V W M P R L M E Q I Q A S F R I V P S D S S H G L D Q
 
AT2G47190.1     S L P T T C E Q V E S - - - - - - - M I T D P S Q P V N E P S P V E P G F V Q F S Q N H H Q Q F V P A T E L S A T S S N
gm026431_Glyma1    T T L C N T Q Q T E S S T D A N P T M F C D N S M V S S Y S S E V D - - - - - - - - - - - L Q P L S L S D T S T T S S S
 
AT2G47190.1     S P A E T - - - - - - - - - - - - - F S D V R G G V V N G S G Y D P S G Q T G F G E F N D W G C V G G D N M W T D E E S
gm026431_Glyma1    E S A E K K E S I S S S L W Q Q W D Y S D L Q - - - - - - - A F E P C - - N G F G D - - - - - - - - - A D L W T D - E N
 
AT2G47190.1     F W F L Q D Q F C P D T T S Y S Y N
gm026431_Glyma1    I W F L Q Q H L A D H L - - - - - -
 
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