fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G47520.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os001685 not found in 207aa AT2G47520.1 1st_1st 0.414965986 Ia
Gm052847 not found in 194aa AT2G47520.1 1st_1st 0.452380952 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT2G47520.1     MCGGAIISDFI-------------WSK-SESEPSQLGSVSSRKKRKPVSVSEERDGKRER
Os001685_Os01t0 MCGGAIIYDYIPAR--RRLCASDFWPDADDSDP-----HTPAPEKPPRA-------KRER
gm052847_Glyma1 MCGGAIIADFIPRQRPRTLTASELWPKRSEPQP--------QPPPPPV--------KRQR
                ******* *:*             *.. .:.:*             *         **:*

AT2G47520.1     KNLYRGIRQRPWGKWAAEIRDPSKGVRVWLGTFKTADEAARAYDVAAIKIRGRKAKLNFP
Os001685_Os01t0 KNQYRGIRQRPWGKWAAEIRDPVKGVRVWLGTYPTAEAAARAYDRAARRIRGAKAKVNFP
gm052847_Glyma1 KNLYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYDKEARKIRGKKAKVNFP
                ** ******************* *********: **: ******  * :*** ***:***

AT2G47520.1     NTQ--------------------------VEEEADTKPGGNQN-----------ELISE-
Os001685_Os01t0 NDFGAAP----------------------APAAAAAKAVPRVAPTPAVLPPPKMEAVSEG
gm052847_Glyma1 NEDDPLPQYGSCKSLNLEFGYDLNQTGLFPSSNADENCGSHVA-----------YSVTEA
                *                                *  :   .               ::* 

AT2G47520.1     ------NQVESLSEDLMALEDYMRFYQIPVADDQSATDIG--------NLWSYQDSN---
Os001685_Os01t0 AGACSSDEVKELSEELLAYENYMSFLGIPYMEGGAASAAGAEEAAAPAGLWTFEDYELPS
gm052847_Glyma1 -----NNKVEKLSEELMAYENLMRFYQIP------ENVVG--------DLWAFPDTSPPL
                      ::*:.***:*:* *: * *  **       .  *        .**:: * .   

AT2G47520.1     ---
Os001685_Os01t0 LAL
gm052847_Glyma1 ---
BoxShade v3.31 C (beta, 970507) Output
AT2G47520.1     M C G G A I I S D F I - - - - - - - - - - - - - W S K - S E S E P S Q L G S V S S R K K R K P V S V S E E R D G K R E R
Os001685_Os01t0    M C G G A I I Y D Y I P A R - - R R L C A S D F W P D A D D S D P - - - - - H T P A P E K P P R A - - - - - - - K R E R
gm052847_Glyma1    M C G G A I I A D F I P R Q R P R T L T A S E L W P K R S E P Q P - - - - - - - - Q P P P P P V - - - - - - - - K R Q R
 
AT2G47520.1     K N L Y R G I R Q R P W G K W A A E I R D P S K G V R V W L G T F K T A D E A A R A Y D V A A I K I R G R K A K L N F P
Os001685_Os01t0    K N Q Y R G I R Q R P W G K W A A E I R D P V K G V R V W L G T Y P T A E A A A R A Y D R A A R R I R G A K A K V N F P
gm052847_Glyma1    K N L Y R G I R Q R P W G K W A A E I R D P R K G V R V W L G T F N T A E E A A R A Y D K E A R K I R G K K A K V N F P
 
AT2G47520.1     N T Q - - - - - - - - - - - - - - - - - - - - - - - - - - V E E E A D T K P G G N Q N - - - - - - - - - - - E L I S E -
Os001685_Os01t0    N D F G A A P - - - - - - - - - - - - - - - - - - - - - - A P A A A A A K A V P R V A P T P A V L P P P K M E A V S E G
gm052847_Glyma1    N E D D P L P Q Y G S C K S L N L E F G Y D L N Q T G L F P S S N A D E N C G S H V A - - - - - - - - - - - Y S V T E A
 
AT2G47520.1     - - - - - - N Q V E S L S E D L M A L E D Y M R F Y Q I P V A D D Q S A T D I G - - - - - - - - N L W S Y Q D S N - - -
Os001685_Os01t0    A G A C S S D E V K E L S E E L L A Y E N Y M S F L G I P Y M E G G A A S A A G A E E A A A P A G L W T F E D Y E L P S
gm052847_Glyma1    - - - - - N N K V E K L S E E L M A Y E N L M R F Y Q I P - - - - - - E N V V G - - - - - - - - D L W A F P D T S P P L
 
AT2G47520.1     - - -
Os001685_Os01t0    L A L
gm052847_Glyma1    - - -
 
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