fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G47520.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os001685 not found in 207aa AT2G47520.1 1st_1st 0.414965986 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G47520.1     MCGGAIISDFI-----------WSKS-ESEPSQLGSVSSRKKRKPVSVSEERDGKRERKN
Os001685_Os01t0 MCGGAIIYDYIPARRRLCASDFWPDADDSDP-----------HTPAPEKPPR-AKRERKN
                ******* *:*           *..: :*:*           :.*.. .  * .******

AT2G47520.1     LYRGIRQRPWGKWAAEIRDPSKGVRVWLGTFKTADEAARAYDVAAIKIRGRKAKLNFPNT
Os001685_Os01t0 QYRGIRQRPWGKWAAEIRDPVKGVRVWLGTYPTAEAAARAYDRAARRIRGAKAKVNFPND
                 ******************* *********: **: ****** ** :*** ***:**** 

AT2G47520.1     QVEEEADTKPGGN---------------QNELISE-------NQVESLSEDLMALEDYMR
Os001685_Os01t0 FGAAPAPAAAAAKAVPRVAPTPAVLPPPKMEAVSEGAGACSSDEVKELSEELLAYENYMS
                     * : ...:               : * :**       ::*:.***:*:* *:** 

AT2G47520.1     FYQIPVADDQSATDIG--------NLWSYQDSN------
Os001685_Os01t0 FLGIPYMEGGAASAAGAEEAAAPAGLWTFEDYELPSLAL
                *  **  :. :*:  *        .**:::* :
BoxShade v3.31 C (beta, 970507) Output
AT2G47520.1     M C G G A I I S D F I - - - - - - - - - - - W S K S - E S E P S Q L G S V S S R K K R K P V S V S E E R D G K R E R K N
Os001685_Os01t0    M C G G A I I Y D Y I P A R R R L C A S D F W P D A D D S D P - - - - - - - - - - - H T P A P E K P P R - A K R E R K N
 
AT2G47520.1     L Y R G I R Q R P W G K W A A E I R D P S K G V R V W L G T F K T A D E A A R A Y D V A A I K I R G R K A K L N F P N T
Os001685_Os01t0    Q Y R G I R Q R P W G K W A A E I R D P V K G V R V W L G T Y P T A E A A A R A Y D R A A R R I R G A K A K V N F P N D
 
AT2G47520.1     Q V E E E A D T K P G G N - - - - - - - - - - - - - - - Q N E L I S E - - - - - - - N Q V E S L S E D L M A L E D Y M R
Os001685_Os01t0    F G A A P A P A A A A A K A V P R V A P T P A V L P P P K M E A V S E G A G A C S S D E V K E L S E E L L A Y E N Y M S
 
AT2G47520.1     F Y Q I P V A D D Q S A T D I G - - - - - - - - N L W S Y Q D S N - - - - - -
Os001685_Os01t0    F L G I P Y M E G G A A S A A G A E E A A A P A G L W T F E D Y E L P S L A L
 
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