fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G47520.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm052847 not found in 194aa AT2G47520.1 1st_1st 0.452380952 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G47520.1     MCGGAIISDFI-------------WSK-SESEPSQLGSVSSRKKRKPVSVSEERDGKRER
gm052847_Glyma1 MCGGAIIADFIPRQRPRTLTASELWPKRSEPQP--------QPPPPPV--------KRQR
                *******:***             *.* **.:*        :    **        **:*

AT2G47520.1     KNLYRGIRQRPWGKWAAEIRDPSKGVRVWLGTFKTADEAARAYDVAAIKIRGRKAKLNFP
gm052847_Glyma1 KNLYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYDKEARKIRGKKAKVNFP
                ********************** **********:**:*******  * ****:***:***

AT2G47520.1     NTQ--------------------------VEEEADTKPGGNQNELISE--NQVESLSEDL
gm052847_Glyma1 NEDDPLPQYGSCKSLNLEFGYDLNQTGLFPSSNADENCGSHVAYSVTEANNKVEKLSEEL
                * :                           ..:** : *.:    ::*  *:**.***:*

AT2G47520.1     MALEDYMRFYQIPVADDQSATDIGNLWSYQDSN---
gm052847_Glyma1 MAYENLMRFYQIP------ENVVGDLWAFPDTSPPL
                ** *: *******       . :*:**:: *:.
BoxShade v3.31 C (beta, 970507) Output
AT2G47520.1     M C G G A I I S D F I - - - - - - - - - - - - - W S K - S E S E P S Q L G S V S S R K K R K P V S V S E E R D G K R E R
gm052847_Glyma1    M C G G A I I A D F I P R Q R P R T L T A S E L W P K R S E P Q P - - - - - - - - Q P P P P P V - - - - - - - - K R Q R
 
AT2G47520.1     K N L Y R G I R Q R P W G K W A A E I R D P S K G V R V W L G T F K T A D E A A R A Y D V A A I K I R G R K A K L N F P
gm052847_Glyma1    K N L Y R G I R Q R P W G K W A A E I R D P R K G V R V W L G T F N T A E E A A R A Y D K E A R K I R G K K A K V N F P
 
AT2G47520.1     N T Q - - - - - - - - - - - - - - - - - - - - - - - - - - V E E E A D T K P G G N Q N E L I S E - - N Q V E S L S E D L
gm052847_Glyma1    N E D D P L P Q Y G S C K S L N L E F G Y D L N Q T G L F P S S N A D E N C G S H V A Y S V T E A N N K V E K L S E E L
 
AT2G47520.1     M A L E D Y M R F Y Q I P V A D D Q S A T D I G N L W S Y Q D S N - - -
gm052847_Glyma1    M A Y E N L M R F Y Q I P - - - - - - E N V V G D L W A F P D T S P P L
 
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