fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G47810.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os005512 not found in 177aa AT2G47810.1 1st_1st 0.548387096 Ia
Sb026432 not found in 215aa AT2G47810.1 1st_1st 0.554838709 Ia
Gm004139 not found in 147aa AT2G47810.1 1st_1st 0.583870967 Ia
Pt017365 not found in 176aa AT2G47810.1 1st_1st 0.587096774 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (1 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT2G47810.1     -------MAGNYHSFQNPIPRYQNYNF--GSSSSNHQHEHDGLVVVVEDQQQEESMMVKE
Os005512_Os01t0 --------MADHHGGH-------------HADGHRRQQQLQG-----EAADQAAAEIIKE
gm004139_Glyma0 --------MGDNNIGKVLEREGFKYNFTAAASDTSAQDE-----------------VIKE
pt017365_POPTR_ ----MVDSIGNNNS----DKEWLKYDF---AGGSTSDDG-----------------IIKE
Sb026432_Sorbi1 LKGPGGGVVGAVHGGA-------EHEMT-GCGAGTGAGGRGGTRV-----------VVSA
                         .  :                 ..                        ::. 

AT2G47810.1     QDRLLPIANVGR---------IMKNILPA---NAKVSKEAKETMQECVS---------EF
Os005512_Os01t0 QDRLLPIANVGR---------IMKQILPP---NAKISKEAKETMQECVS---------EF
gm004139_Glyma0 QDRLLPIANVGR---------IMKQILPP---NAKISKEAKETMQECVS---------EF
pt017365_POPTR_ QDRLLPIANVGR---------IMKQILPP---NAKISKEAKETMQECVS---------EF
Sb026432_Sorbi1 WSGSAPARGCGRGGAVALELAVLVEV-PAHGVDVVVEAEGAEGPADVVAVDGLALLLVAL
                 .   *  . **         :: :: *.   :. :. *. *   : *:          :

AT2G47810.1     ISFVTGEASDKCHKEKRKTVNGDDICWAMANLGFDDYAAQLKKYLHRYRVL-EGEKP---
Os005512_Os01t0 ISFVTGEASDKCHKEKRKTVNGDDVCWAFGALGFDDYVDPMRRYLNKYREL-EGDRAA--
gm004139_Glyma0 ISFVTGEASDKCHKEKRKTVNGDDICWALATLGFDDYSEPLKRYLHKYREF-EGERA---
pt017365_POPTR_ ISFVTGEASDKCHKEKRKTVNGDDICWALASLGFDDYSEPLKRYLYKYREV-EGERA---
Sb026432_Sorbi1 VGCLAGDEADEL---------GDALLHRLLGL-LGDLGVGRQDLLHDAADVGDGQQPVLL
                :. ::*: :*:          ** :   :  * :.*     :  *     . :*::.   

AT2G47810.1     ------NHHGKGGPKSSPDN----------------------------------------
Os005512_Os01t0 --AAATSRS-GAGAAAGPDHPS---SSSSAAAATAGH------------FMFN-----AM
gm004139_Glyma0 ------NQN-KGNNNTYENNIA------------------------------------NI
pt017365_POPTR_ ------SHN-KASNNEEKDDSSKYRGESILKATVYPH------------TPLKL--PGNI
Sb026432_Sorbi1 LDLQVTPSSGAAAHQTRPPPVP----VRRLPVEVVGHAAAVRRRRRRLPSPFSSPRPPSL
                           .                                                

AT2G47810.1     --------------
Os005512_Os01t0 DRSTD----SSRQF
gm004139_Glyma0 --------------
pt017365_POPTR_ DRSNS----LSRRF
Sb026432_Sorbi1 ASSSDPLVCVS---
BoxShade v3.31 C (beta, 970507) Output
AT2G47810.1     - - - - - - - M A G N Y H S F Q N P I P R Y Q N Y N F - - G S S S S N H Q H E H D G L V V V V E D Q Q Q E E S M M V K E
Os005512_Os01t0    - - - - - - - - M A D H H G G H - - - - - - - - - - - - - H A D G H R R Q Q Q L Q G - - - - - E A A D Q A A A E I I K E
gm004139_Glyma0    - - - - - - - - M G D N N I G K V L E R E G F K Y N F T A A A S D T S A Q D E - - - - - - - - - - - - - - - - - V I K E
pt017365_POPTR_    - - - - M V D S I G N N N S - - - - D K E W L K Y D F - - - A G G S T S D D G - - - - - - - - - - - - - - - - - I I K E
Sb026432_Sorbi1    L K G P G G G V V G A V H G G A - - - - - - - E H E M T - G C G A G T G A G G R G G T R V - - - - - - - - - - - V V S A
 
AT2G47810.1     Q D R L L P I A N V G R - - - - - - - - - I M K N I L P A - - - N A K V S K E A K E T M Q E C V S - - - - - - - - - E F
Os005512_Os01t0    Q D R L L P I A N V G R - - - - - - - - - I M K Q I L P P - - - N A K I S K E A K E T M Q E C V S - - - - - - - - - E F
gm004139_Glyma0    Q D R L L P I A N V G R - - - - - - - - - I M K Q I L P P - - - N A K I S K E A K E T M Q E C V S - - - - - - - - - E F
pt017365_POPTR_    Q D R L L P I A N V G R - - - - - - - - - I M K Q I L P P - - - N A K I S K E A K E T M Q E C V S - - - - - - - - - E F
Sb026432_Sorbi1    W S G S A P A R G C G R G G A V A L E L A V L V E V - P A H G V D V V V E A E G A E G P A D V V A V D G L A L L L V A L
 
AT2G47810.1     I S F V T G E A S D K C H K E K R K T V N G D D I C W A M A N L G F D D Y A A Q L K K Y L H R Y R V L - E G E K P - - -
Os005512_Os01t0    I S F V T G E A S D K C H K E K R K T V N G D D V C W A F G A L G F D D Y V D P M R R Y L N K Y R E L - E G D R A A - -
gm004139_Glyma0    I S F V T G E A S D K C H K E K R K T V N G D D I C W A L A T L G F D D Y S E P L K R Y L H K Y R E F - E G E R A - - -
pt017365_POPTR_    I S F V T G E A S D K C H K E K R K T V N G D D I C W A L A S L G F D D Y S E P L K R Y L Y K Y R E V - E G E R A - - -
Sb026432_Sorbi1    V G C L A G D E A D E L - - - - - - - - - G D A L L H R L L G L - L G D L G V G R Q D L L H D A A D V G D G Q Q P V L L
 
AT2G47810.1     - - - - - - N H H G K G G P K S S P D N - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Os005512_Os01t0    - - A A A T S R S - G A G A A A G P D H P S - - - S S S S A A A A T A G H - - - - - - - - - - - - F M F N - - - - - A M
gm004139_Glyma0    - - - - - - N Q N - K G N N N T Y E N N I A - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - N I
pt017365_POPTR_    - - - - - - S H N - K A S N N E E K D D S S K Y R G E S I L K A T V Y P H - - - - - - - - - - - - T P L K L - - P G N I
Sb026432_Sorbi1    L D L Q V T P S S G A A A H Q T R P P P V P - - - - V R R L P V E V V G H A A A V R R R R R R L P S P F S S P R P P S L
 
AT2G47810.1     - - - - - - - - - - - - - -
Os005512_Os01t0    D R S T D - - - - S S R Q F
gm004139_Glyma0    - - - - - - - - - - - - - -
pt017365_POPTR_    D R S N S - - - - L S R R F
Sb026432_Sorbi1    A S S S D P L V C V S - - -
 
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