fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G47810.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pp018837 not found in 218aa AT4G14540.1 1st_not 0.522580645 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G47810.1     MAGNYHSFQNP-IPRYQNYNFGSSSSNHQHEHDGLVVVVEDQQQEESMMVKEQDRLLPIA
pp018837_Pp1s46 MADSYG--HNPGSPENDPHSDNESGGGHYRDHDA--------------SVREQDRFLPIA
                **..*   :**  *. : :. ..*...* ::**.               *:****:****

AT2G47810.1     NVGRIMKNILPANAKVSKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICWAM
pp018837_Pp1s46 NVSRIMKKALPSNAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAM
                **.****: **:***:**:****:**********:********::*****:****: ***

AT2G47810.1     ANLGFDDYAAQLKKYLHRYRVLEGEKP------NH-------------------------
pp018837_Pp1s46 STLGFEDYVEPLKVYLHKYRELEGEKTSVTKGGDHSAGKESNQSNQGGIGSLGMPGGMIG
                :.***:**.  ** ***:** *****.      :*                         

AT2G47810.1     -----HGKGGPKS------------------SPDN-------------------
pp018837_Pp1s46 MNGSMHQQGIPVSMQMMQQSYGHQSPLGMMFAPHQTIPQYQMSMQSGSNQSRGL
                     * :* * *                  :*.:
BoxShade v3.31 C (beta, 970507) Output
AT2G47810.1     M A G N Y H S F Q N P - I P R Y Q N Y N F G S S S S N H Q H E H D G L V V V V E D Q Q Q E E S M M V K E Q D R L L P I A
pp018837_Pp1s46    M A D S Y G - - H N P G S P E N D P H S D N E S G G G H Y R D H D A - - - - - - - - - - - - - - S V R E Q D R F L P I A
 
AT2G47810.1     N V G R I M K N I L P A N A K V S K E A K E T M Q E C V S E F I S F V T G E A S D K C H K E K R K T V N G D D I C W A M
pp018837_Pp1s46    N V S R I M K K A L P S N A K I S K D A K E T V Q E C V S E F I S F I T G E A S D K C Q R E K R K T I N G D D L L W A M
 
AT2G47810.1     A N L G F D D Y A A Q L K K Y L H R Y R V L E G E K P - - - - - - N H - - - - - - - - - - - - - - - - - - - - - - - - -
pp018837_Pp1s46    S T L G F E D Y V E P L K V Y L H K Y R E L E G E K T S V T K G G D H S A G K E S N Q S N Q G G I G S L G M P G G M I G
 
AT2G47810.1     - - - - - H G K G G P K S - - - - - - - - - - - - - - - - - - S P D N - - - - - - - - - - - - - - - - - - -
pp018837_Pp1s46    M N G S M H Q Q G I P V S M Q M M Q Q S Y G H Q S P L G M M F A P H Q T I P Q Y Q M S M Q S G S N Q S R G L
 
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