fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G47810.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt041815 not found in 150aa AT2G47810.1 not_1st 0.541935483 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G47810.1     MAGNYHSFQNPIPRYQNYNFGSSSSNHQHEHDGLVVVVEDQQQEESMMVKEQDRLLPIAN
pt041815_POPTR_ -------------MVDNVGAGASSD------DGGVKL-------------EQDRLLPIAN
                               :* . *:**.      ** * :             **********

AT2G47810.1     VGRIMKNILPANAKVSKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICWAMA
pt041815_POPTR_ VGRIMKQILPANAKISKEAKETMQECASEFISFVTGEASEKCRKERRKTVNGDDVCWAMG
                ******:*******:***********.************:**:**:********:****.

AT2G47810.1     NLGFDDYAAQLKKYLHRYRVLEGEKPNHHG-------------KGGPKSSPDN-------
pt041815_POPTR_ ALGFDDYAGPLRRYLQRYREIEGDRANQEKPANANNTSIADQEKEAPPSSSSSYRNNQGI
                 *******. *::**:*** :**::.*:.              * .* **...       

AT2G47810.1     --
pt041815_POPTR_ RM
BoxShade v3.31 C (beta, 970507) Output
AT2G47810.1     M A G N Y H S F Q N P I P R Y Q N Y N F G S S S S N H Q H E H D G L V V V V E D Q Q Q E E S M M V K E Q D R L L P I A N
pt041815_POPTR_    - - - - - - - - - - - - - M V D N V G A G A S S D - - - - - - D G G V K L - - - - - - - - - - - - - E Q D R L L P I A N
 
AT2G47810.1     V G R I M K N I L P A N A K V S K E A K E T M Q E C V S E F I S F V T G E A S D K C H K E K R K T V N G D D I C W A M A
pt041815_POPTR_    V G R I M K Q I L P A N A K I S K E A K E T M Q E C A S E F I S F V T G E A S E K C R K E R R K T V N G D D V C W A M G
 
AT2G47810.1     N L G F D D Y A A Q L K K Y L H R Y R V L E G E K P N H H G - - - - - - - - - - - - - K G G P K S S P D N - - - - - - -
pt041815_POPTR_    A L G F D D Y A G P L R R Y L Q R Y R E I E G D R A N Q E K P A N A N N T S I A D Q E K E A P P S S S S S Y R N N Q G I
 
AT2G47810.1     - -
pt041815_POPTR_    R M
 
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