fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G47810.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt017365 not found in 176aa AT2G47810.1 1st_1st 0.587096774 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G47810.1     ---MAGNYHSFQNPIPRYQNYNF-GSSSSNHQHEHDGLVVVVEDQQQEESMMVKEQDRLL
pt017365_POPTR_ MVDSIGN----NNSDKEWLKYDFAGGSTSD-----DGI--------------IKEQDRLL
                     **    :*.  .: :*:* *.*:*:     **:              :*******

AT2G47810.1     PIANVGRIMKNILPANAKVSKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDIC
pt017365_POPTR_ PIANVGRIMKQILPPNAKISKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDIC
                **********:***.***:*****************************************

AT2G47810.1     WAMANLGFDDYAAQLKKYLHRYRVLEGEKPNHHGKGG-----------------------
pt017365_POPTR_ WALASLGFDDYSEPLKRYLYKYREVEGERASHNKASNNEEKDDSSKYRGESILKATVYPH
                **:*.******:  **:**::** :***:..*:  ..                       

AT2G47810.1     -PKSSPDN-----------
pt017365_POPTR_ TPLKLPGNIDRSNSLSRRF
                 * . *.*
BoxShade v3.31 C (beta, 970507) Output
AT2G47810.1     - - - M A G N Y H S F Q N P I P R Y Q N Y N F - G S S S S N H Q H E H D G L V V V V E D Q Q Q E E S M M V K E Q D R L L
pt017365_POPTR_    M V D S I G N - - - - N N S D K E W L K Y D F A G G S T S D - - - - - D G I - - - - - - - - - - - - - - I K E Q D R L L
 
AT2G47810.1     P I A N V G R I M K N I L P A N A K V S K E A K E T M Q E C V S E F I S F V T G E A S D K C H K E K R K T V N G D D I C
pt017365_POPTR_    P I A N V G R I M K Q I L P P N A K I S K E A K E T M Q E C V S E F I S F V T G E A S D K C H K E K R K T V N G D D I C
 
AT2G47810.1     W A M A N L G F D D Y A A Q L K K Y L H R Y R V L E G E K P N H H G K G G - - - - - - - - - - - - - - - - - - - - - - -
pt017365_POPTR_    W A L A S L G F D D Y S E P L K R Y L Y K Y R E V E G E R A S H N K A S N N E E K D D S S K Y R G E S I L K A T V Y P H
 
AT2G47810.1     - P K S S P D N - - - - - - - - - - -
pt017365_POPTR_    T P L K L P G N I D R S N S L S R R F
 
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