fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G47810.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os005511 not found in 193aa AT2G47810.1 not_1st 0.429032258 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G47810.1     MAG--NYHSFQNPIPRYQNYN----FGSSSSNHQHEHDGLVVVVEDQQQEESMMVKEQDR
Os005511_Os01t0 MSRDLNFSGF-NQLGRLQPMQGLPRASSSSTSASRDRDG---GDGDGGGGGVTMTNGQDN
                *:   *: .* * : * *  :     .***:. .:::**      *       *.: **.

AT2G47810.1     LLPIANVGRIMKNILPANAKVSKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDD
Os005511_Os01t0 LLPIANVGRIMKDGLPPQAKISKRAKETIQECATEFISFVTGEASERCRRERRKTVNGDD
                ************: **.:**:**.****:***.:***********::*::*:********

AT2G47810.1     ICWAMANLGFDDYAAQLKKYLHRYRVLEGEK-----------------PNHHG-------
Os005511_Os01t0 VCHAMRSLGLDHYADAMHRYLQRYR--EGEELAASLNSSSSAAAAAAAAGSRGGGAIQID
                :* ** .**:*.**  :::**:***  ***:                 .. :*       

AT2G47810.1     ---------KGGPKSSPDN
Os005511_Os01t0 VRAELSIFRSGNNQGRPNN
                         .*. :. *:*
BoxShade v3.31 C (beta, 970507) Output
AT2G47810.1     M A G - - N Y H S F Q N P I P R Y Q N Y N - - - - F G S S S S N H Q H E H D G L V V V V E D Q Q Q E E S M M V K E Q D R
Os005511_Os01t0    M S R D L N F S G F - N Q L G R L Q P M Q G L P R A S S S S T S A S R D R D G - - - G D G D G G G G G V T M T N G Q D N
 
AT2G47810.1     L L P I A N V G R I M K N I L P A N A K V S K E A K E T M Q E C V S E F I S F V T G E A S D K C H K E K R K T V N G D D
Os005511_Os01t0    L L P I A N V G R I M K D G L P P Q A K I S K R A K E T I Q E C A T E F I S F V T G E A S E R C R R E R R K T V N G D D
 
AT2G47810.1     I C W A M A N L G F D D Y A A Q L K K Y L H R Y R V L E G E K - - - - - - - - - - - - - - - - - P N H H G - - - - - - -
Os005511_Os01t0    V C H A M R S L G L D H Y A D A M H R Y L Q R Y R - - E G E E L A A S L N S S S S A A A A A A A A G S R G G G A I Q I D
 
AT2G47810.1     - - - - - - - - - K G G P K S S P D N
Os005511_Os01t0    V R A E L S I F R S G N N Q G R P N N
 
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