fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G47810.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os005512 not found in 177aa AT2G47810.1 1st_1st 0.548387096 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G47810.1     MAGNYHSFQNPIPRYQNYNFGSSSSNH--QHEHDGLVVVVEDQQQEESMMVKEQDRLLPI
Os005512_Os01t0 MA-DHHG-------------GHHADGHRRQQQLQG-----EAADQAAAEIIKEQDRLLPI
                ** ::*.             *  :..*  *:: :*     *  :*  : ::*********

AT2G47810.1     ANVGRIMKNILPANAKVSKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICWA
Os005512_Os01t0 ANVGRIMKQILPPNAKISKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDVCWA
                ********:***.***:***************************************:***

AT2G47810.1     MANLGFDDYAAQLKKYLHRYRVLEGEK----PNHHGKGGPKSSPDN--------------
Os005512_Os01t0 FGALGFDDYVDPMRRYLNKYRELEGDRAAAAATSRSGAGAAAGPDHPSSSSSAAAATAGH
                :. ******.  :::**::** ***::    .. :. .*. :.**:              

AT2G47810.1     ----------------
Os005512_Os01t0 FMFNAMDRSTDSSRQF
BoxShade v3.31 C (beta, 970507) Output
AT2G47810.1     M A G N Y H S F Q N P I P R Y Q N Y N F G S S S S N H - - Q H E H D G L V V V V E D Q Q Q E E S M M V K E Q D R L L P I
Os005512_Os01t0    M A - D H H G - - - - - - - - - - - - - G H H A D G H R R Q Q Q L Q G - - - - - E A A D Q A A A E I I K E Q D R L L P I
 
AT2G47810.1     A N V G R I M K N I L P A N A K V S K E A K E T M Q E C V S E F I S F V T G E A S D K C H K E K R K T V N G D D I C W A
Os005512_Os01t0    A N V G R I M K Q I L P P N A K I S K E A K E T M Q E C V S E F I S F V T G E A S D K C H K E K R K T V N G D D V C W A
 
AT2G47810.1     M A N L G F D D Y A A Q L K K Y L H R Y R V L E G E K - - - - P N H H G K G G P K S S P D N - - - - - - - - - - - - - -
Os005512_Os01t0    F G A L G F D D Y V D P M R R Y L N K Y R E L E G D R A A A A A T S R S G A G A A A G P D H P S S S S S A A A A T A G H
 
AT2G47810.1     - - - - - - - - - - - - - - - -
Os005512_Os01t0    F M F N A M D R S T D S S R Q F
 
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