fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G47810.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm026530 not found in 145aa AT2G47810.1 not_1st 0.567741935 II
Gm024076 not found in 126aa AT2G47810.1 not_1st 0.548387096 II
Gm042284 not found in 98aa AT2G47810.1 not_1st 0.438709677 II
Gm045775 not found in 89aa AT2G47810.1 not_1st 0.432258064 II
Gm019412 not found in 89aa AT2G47810.1 not_1st 0.432258064 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT2G47810.1     MAGNYH------SFQNPIPRYQNYNF-----GSSSSNHQHEHDGLVVVVEDQQQEESMMV
gm019412_Glyma0 ------------------------------------------------------------
gm026530_Glyma1 MGDNIGKVLDREGFK--------YNFTASASGTSAQD--------------------GVI
gm045775_Glyma1 ------------------------------------------------------------
gm024076_Glyma0 MEDSIG-------------------------GSSSND-------------------NNII
gm042284_Glyma1 ------------------------------------------------------------
                                                                            

AT2G47810.1     KEQDRLLPIANVGRIMKNILPANAKVSKEAKETMQECVSEFISFVTGEASDKCHKEKRKT
gm019412_Glyma0 ---------------MKQILPPNAKISKESKETMQECVSEFISFVTSEASEKCRKERRKT
gm026530_Glyma1 KEQDRLLPIANVGRIMKQILPPNAKISKEAKETMQESVSEFISFVTGEASDKCHKEKRKT
gm045775_Glyma1 ---------------MKQILPPNAKISKESKETMQECVSEFISFVTSEASEKCRKERRKT
gm024076_Glyma0 KEQDRLLPIANVGRLMKQILPQNAKISKEAKETMQECVSEFISFVTSEASEKCRKERRKT
gm042284_Glyma1 ---------------MKRILPQNAKISKEAKETMQECVSEFISFVTSEASEKCRKERRKT
                               **.*** ***:***:******.*********.***:**:**:***

AT2G47810.1     VNGDDICWAMANLGFDDYAAQLKKYLHRYRVLEGEKPN----HHGKGGPKSSPDN-
gm019412_Glyma0 VNGDDICWALGSLGFDDYAEPLRRYLQRYRELEVD--------RGNSPPKRE----
gm026530_Glyma1 VNGDDICWALATLGFDDYSEPLKRYLYKYREMEGERAN---QNKGSNGYENNIANI
gm045775_Glyma1 VNGDDICWALGSLGFDDYAEPLRRYLQRYREQELD--------RANNPPKRG----
gm024076_Glyma0 VNGDDICWALATLGFDDYAEPMRRYLHRYREVEVDHNN-KLGPRTNSTPLN-----
gm042284_Glyma1 VNGDDICWALATLGFDNYAEPMRRYLHRYREVEVDHNKVNLQEKGNSPEEKDD---
                *********:..****:*:  :::** :**  * :        : ..
BoxShade v3.31 C (beta, 970507) Output
AT2G47810.1     M A G N Y H - - - - - - S F Q N P I P R Y Q N Y N F - - - - - G S S S S N H Q H E H D G L V V V V E D Q Q Q E E S M M V
gm019412_Glyma0    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm026530_Glyma1    M G D N I G K V L D R E G F K - - - - - - - - Y N F T A S A S G T S A Q D - - - - - - - - - - - - - - - - - - - - G V I
gm045775_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm024076_Glyma0    M E D S I G - - - - - - - - - - - - - - - - - - - - - - - - - G S S S N D - - - - - - - - - - - - - - - - - - - N N I I
gm042284_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT2G47810.1     K E Q D R L L P I A N V G R I M K N I L P A N A K V S K E A K E T M Q E C V S E F I S F V T G E A S D K C H K E K R K T
gm019412_Glyma0    - - - - - - - - - - - - - - - M K Q I L P P N A K I S K E S K E T M Q E C V S E F I S F V T S E A S E K C R K E R R K T
gm026530_Glyma1    K E Q D R L L P I A N V G R I M K Q I L P P N A K I S K E A K E T M Q E S V S E F I S F V T G E A S D K C H K E K R K T
gm045775_Glyma1    - - - - - - - - - - - - - - - M K Q I L P P N A K I S K E S K E T M Q E C V S E F I S F V T S E A S E K C R K E R R K T
gm024076_Glyma0    K E Q D R L L P I A N V G R L M K Q I L P Q N A K I S K E A K E T M Q E C V S E F I S F V T S E A S E K C R K E R R K T
gm042284_Glyma1    - - - - - - - - - - - - - - - M K R I L P Q N A K I S K E A K E T M Q E C V S E F I S F V T S E A S E K C R K E R R K T
 
AT2G47810.1     V N G D D I C W A M A N L G F D D Y A A Q L K K Y L H R Y R V L E G E K P N - - - - H H G K G G P K S S P D N -
gm019412_Glyma0    V N G D D I C W A L G S L G F D D Y A E P L R R Y L Q R Y R E L E V D - - - - - - - - R G N S P P K R E - - - -
gm026530_Glyma1    V N G D D I C W A L A T L G F D D Y S E P L K R Y L Y K Y R E M E G E R A N - - - Q N K G S N G Y E N N I A N I
gm045775_Glyma1    V N G D D I C W A L G S L G F D D Y A E P L R R Y L Q R Y R E Q E L D - - - - - - - - R A N N P P K R G - - - -
gm024076_Glyma0    V N G D D I C W A L A T L G F D D Y A E P M R R Y L H R Y R E V E V D H N N - K L G P R T N S T P L N - - - - -
gm042284_Glyma1    V N G D D I C W A L A T L G F D N Y A E P M R R Y L H R Y R E V E V D H N K V N L Q E K G N S P E E K D D - - -
 
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