fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G47810.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm004139 not found in 147aa AT2G47810.1 1st_1st 0.583870967 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G47810.1     MAGN-------YHSFQNPIPRYQNYNFGSSSSNHQHEHDGLVVVVEDQQQEESMMVKEQD
gm004139_Glyma0 MGDNNIGKVLEREGFK--------YNFTAAAS-------------DTSAQDE--VIKEQD
                *..*        ..*:        *** :::*             : . *:*  ::****

AT2G47810.1     RLLPIANVGRIMKNILPANAKVSKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGD
gm004139_Glyma0 RLLPIANVGRIMKQILPPNAKISKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGD
                *************:***.***:**************************************

AT2G47810.1     DICWAMANLGFDDYAAQLKKYLHRYRVLEGEKPNHHGKGGPKSSPDN----
gm004139_Glyma0 DICWALATLGFDDYSEPLKRYLHKYREFEGERANQN-KGNNNTYENNIANI
                *****:*.******:  **:***:** :***:.*:: **. ::  :*
BoxShade v3.31 C (beta, 970507) Output
AT2G47810.1     M A G N - - - - - - - Y H S F Q N P I P R Y Q N Y N F G S S S S N H Q H E H D G L V V V V E D Q Q Q E E S M M V K E Q D
gm004139_Glyma0    M G D N N I G K V L E R E G F K - - - - - - - - Y N F T A A A S - - - - - - - - - - - - - D T S A Q D E - - V I K E Q D
 
AT2G47810.1     R L L P I A N V G R I M K N I L P A N A K V S K E A K E T M Q E C V S E F I S F V T G E A S D K C H K E K R K T V N G D
gm004139_Glyma0    R L L P I A N V G R I M K Q I L P P N A K I S K E A K E T M Q E C V S E F I S F V T G E A S D K C H K E K R K T V N G D
 
AT2G47810.1     D I C W A M A N L G F D D Y A A Q L K K Y L H R Y R V L E G E K P N H H G K G G P K S S P D N - - - -
gm004139_Glyma0    D I C W A L A T L G F D D Y S E P L K R Y L H K Y R E F E G E R A N Q N - K G N N N T Y E N N I A N I
 
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