Input
| Putative repression domain
|
|
AT2G47890.1 |
not found |
|
Ortholog
| Putative repression domain
| Reverse top hit
| Relation
| Blast score ratio
| Type
|
Pt003101 |
not found in 365aa |
AT2G47890.1 |
1st_1st |
0.373205741 |
Ib |
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.
CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)
AT2G47890.1 MEAEEGHQRDRLCDYCDSSVALVYCKADSAKLCLACDKQVHVANQLFAKHFRSLLCDSCN
pt003101_POPTR_ MKPRQ--QQKRLCDYCNDTTALLYCRADSAKLCFSCDHEVHSTNQLFSKHTRSLLCDACH
*:..: *:.******:.:.**:**:*******::**::** :****:** ******:*:
AT2G47890.1 ESPSSLFCETERSVLCQNCDWQHHTAS--SSLHSRRPFEGFTGCPSVPELLAIVGLDDL-
pt003101_POPTR_ ASPVSIFCQTEHSVFCQNCDWERHSLSSLSSTHIRRPIEGFTGCPSGNELMTILGFEDLG
** *:**:**:**:******::*: * ** * ***:******** **::*:*::**
AT2G47890.1 -----------------TLDSG----LLWESPEIVSLNDLIVSGGSGTHNFRATDVPPLP
pt003101_POPTR_ LKKSLFFSEESDGFLGSELDDGCSDLFLWDSPA-VCIDDLIVSSDSGS-NFQTLGVPPLP
**.* :**:** *.::*****..**: **:: .*****
AT2G47890.1 KNRHATCGKYKDEMIRQLRGLSRSEPGCLKFETPDAEIDAGFQFLAPDLFSTCELESGLK
pt003101_POPTR_ KNRNAACGQHKEEILCQLRELVR---------------------LKPDPYGNADIDPA--
***:*:**::*:*:: *** * * * ** :...:::..
AT2G47890.1 WFDQQDHEDFPYCSLLKNLSESDEKPENVDR-----------------------------
pt003101_POPTR_ -------------NILQSL-DADPQPPNLNTIGDPGAFTSYKENLPDWLADYGEAANQVL
.:*:.* ::* :* *::
AT2G47890.1 ----------ESSVMVP-----VSGCLNRCEEETVMVPVITSTRSM-------THEINSL
pt003101_POPTR_ FLSTLPSSNFEESCAVPDKEFNIIGSASHVHDDHAAEPQHLTIETLPALPNVVTHELNSQ
*.* ** : *. .: .:: . * : .:: ***:**
AT2G47890.1 ERNSALSRYKEKKKSRRYEKHIRYESRKVRAESRTRIRGRFAKAADP
pt003101_POPTR_ ERDSAISRYKEKKKTRRYSKHIRYESRKVRAEGRTRIRGRFAKMDH-
**:**:********:***.*************.********** .
BoxShade v3.31 C (beta, 970507) Output
AT2G47890.1 |
M |
E |
A |
E |
E |
G |
H |
Q |
R |
D |
R |
L |
C |
D |
Y |
C |
D |
S |
S |
V |
A |
L |
V |
Y |
C |
K |
A |
D |
S |
A |
K |
L |
C |
L |
A |
C |
D |
K |
Q |
V |
H |
V |
A |
N |
Q |
L |
F |
A |
K |
H |
F |
R |
S |
L |
L |
C |
D |
S |
C |
N |
pt003101_POPTR_ |
M |
K |
P |
R |
Q |
- |
- |
Q |
Q |
K |
R |
L |
C |
D |
Y |
C |
N |
D |
T |
T |
A |
L |
L |
Y |
C |
R |
A |
D |
S |
A |
K |
L |
C |
F |
S |
C |
D |
H |
E |
V |
H |
S |
T |
N |
Q |
L |
F |
S |
K |
H |
T |
R |
S |
L |
L |
C |
D |
A |
C |
H |
|
AT2G47890.1 |
E |
S |
P |
S |
S |
L |
F |
C |
E |
T |
E |
R |
S |
V |
L |
C |
Q |
N |
C |
D |
W |
Q |
H |
H |
T |
A |
S |
- |
- |
S |
S |
L |
H |
S |
R |
R |
P |
F |
E |
G |
F |
T |
G |
C |
P |
S |
V |
P |
E |
L |
L |
A |
I |
V |
G |
L |
D |
D |
L |
- |
pt003101_POPTR_ |
A |
S |
P |
V |
S |
I |
F |
C |
Q |
T |
E |
H |
S |
V |
F |
C |
Q |
N |
C |
D |
W |
E |
R |
H |
S |
L |
S |
S |
L |
S |
S |
T |
H |
I |
R |
R |
P |
I |
E |
G |
F |
T |
G |
C |
P |
S |
G |
N |
E |
L |
M |
T |
I |
L |
G |
F |
E |
D |
L |
G |
|
AT2G47890.1 |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
T |
L |
D |
S |
G |
- |
- |
- |
- |
L |
L |
W |
E |
S |
P |
E |
I |
V |
S |
L |
N |
D |
L |
I |
V |
S |
G |
G |
S |
G |
T |
H |
N |
F |
R |
A |
T |
D |
V |
P |
P |
L |
P |
pt003101_POPTR_ |
L |
K |
K |
S |
L |
F |
F |
S |
E |
E |
S |
D |
G |
F |
L |
G |
S |
E |
L |
D |
D |
G |
C |
S |
D |
L |
F |
L |
W |
D |
S |
P |
A |
- |
V |
C |
I |
D |
D |
L |
I |
V |
S |
S |
D |
S |
G |
S |
- |
N |
F |
Q |
T |
L |
G |
V |
P |
P |
L |
P |
|
AT2G47890.1 |
K |
N |
R |
H |
A |
T |
C |
G |
K |
Y |
K |
D |
E |
M |
I |
R |
Q |
L |
R |
G |
L |
S |
R |
S |
E |
P |
G |
C |
L |
K |
F |
E |
T |
P |
D |
A |
E |
I |
D |
A |
G |
F |
Q |
F |
L |
A |
P |
D |
L |
F |
S |
T |
C |
E |
L |
E |
S |
G |
L |
K |
pt003101_POPTR_ |
K |
N |
R |
N |
A |
A |
C |
G |
Q |
H |
K |
E |
E |
I |
L |
C |
Q |
L |
R |
E |
L |
V |
R |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
L |
K |
P |
D |
P |
Y |
G |
N |
A |
D |
I |
D |
P |
A |
- |
- |
|
AT2G47890.1 |
W |
F |
D |
Q |
Q |
D |
H |
E |
D |
F |
P |
Y |
C |
S |
L |
L |
K |
N |
L |
S |
E |
S |
D |
E |
K |
P |
E |
N |
V |
D |
R |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
pt003101_POPTR_ |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
N |
I |
L |
Q |
S |
L |
- |
D |
A |
D |
P |
Q |
P |
P |
N |
L |
N |
T |
I |
G |
D |
P |
G |
A |
F |
T |
S |
Y |
K |
E |
N |
L |
P |
D |
W |
L |
A |
D |
Y |
G |
E |
A |
A |
N |
Q |
V |
L |
|
AT2G47890.1 |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
E |
S |
S |
V |
M |
V |
P |
- |
- |
- |
- |
- |
V |
S |
G |
C |
L |
N |
R |
C |
E |
E |
E |
T |
V |
M |
V |
P |
V |
I |
T |
S |
T |
R |
S |
M |
- |
- |
- |
- |
- |
- |
- |
T |
H |
E |
I |
N |
S |
L |
pt003101_POPTR_ |
F |
L |
S |
T |
L |
P |
S |
S |
N |
F |
E |
E |
S |
C |
A |
V |
P |
D |
K |
E |
F |
N |
I |
I |
G |
S |
A |
S |
H |
V |
H |
D |
D |
H |
A |
A |
E |
P |
Q |
H |
L |
T |
I |
E |
T |
L |
P |
A |
L |
P |
N |
V |
V |
T |
H |
E |
L |
N |
S |
Q |
|
AT2G47890.1 |
E |
R |
N |
S |
A |
L |
S |
R |
Y |
K |
E |
K |
K |
K |
S |
R |
R |
Y |
E |
K |
H |
I |
R |
Y |
E |
S |
R |
K |
V |
R |
A |
E |
S |
R |
T |
R |
I |
R |
G |
R |
F |
A |
K |
A |
A |
D |
P |
pt003101_POPTR_ |
E |
R |
D |
S |
A |
I |
S |
R |
Y |
K |
E |
K |
K |
K |
T |
R |
R |
Y |
S |
K |
H |
I |
R |
Y |
E |
S |
R |
K |
V |
R |
A |
E |
G |
R |
T |
R |
I |
R |
G |
R |
F |
A |
K |
M |
D |
H |
- |
|
|