fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G47890.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb021516 KVYPKGLALMLCLALI in 388/498 AT2G47890.1 1st_1st 0.218500797 Ib
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G47890.1     ----------------MEAEEGHQRDRL--------------------------------
Sb021516_Sorbi1 AQSHDPAVTCHRKSNAMGEDDDDQRNQMLGAGLDHEPERRPGEAEPEEGKKPAASEAEAG
                                *  ::..**:::                                

AT2G47890.1     ----------CDYCDSSVALVYCKADSAKLCLACDKQVHVANQLFAKHFRSLLCDSCNES
Sb021516_Sorbi1 GDGAGTEAATCDYCGTAAAAVYCRADSARLCLPCDRLVHGANGVCSRHARAPLCADCRAA
                          ****.::.* ***:****:***.**: ** ** : ::* *: ** .*. :

AT2G47890.1     PSSLFCETERSVLCQNCDWQHHT--ASSSLHSRRPFEGFTGCPSVPELLAIVGL----DD
Sb021516_Sorbi1 GAVFRRASSSAFLCSNCDFGRHRDGGDPPLHDRCAVQPYSGCPPASDLAALLGVPLFDKP
                 : :   :. :.**.***: :*   ....**.* ..: ::***...:* *::*:    . 

AT2G47890.1     LTLDSGL---LWESPEIVSLNDLIVSGGSGTHNFRATDVPPLPKNRHATC-GKYKDEMIR
Sb021516_Sorbi1 ATEDGGAWWNIWEEPQVLSLEDLIVP-TTPCHGFEPLLTPSSPKNRSISPDGKMNEEILR
                 * *.*    :**.*:::**:****.  :  *.*..  .*. ****  :  ** ::*::*

AT2G47890.1     QLRGLSRSEPGC-LKFETPDAEIDAGFQFLAPDLFSTCELESGLKWF-DQQDHEDFPYCS
Sb021516_Sorbi1 QLGELAESDGGVQASAGREEAEQAGGDQFPS---WASPQYATGHGNFGTENNHE---VAT
                **  *:.*: *   .    :**  .* ** :   ::: :  :*   *  :::**    .:

AT2G47890.1     LLKNLSESDEKPENVDRE----------SSVMVPVSG---CLNRCEEETVMVPVITSTRS
Sb021516_Sorbi1 MPTPLYENG-RWNNCDLDALNDACKVEVAYDQVPVSSAEPCLSSFAPLSEICPSISNGNS
                : . * *.. : :* * :          :   ****.   **.     : : * *:. .*

AT2G47890.1     M--THEINS--------------------LERNSALSRYKEKKKSRRYEKHIRYESRKVR
Sb021516_Sorbi1 MEDNHQVNPGIGMPMQGLPKRTGFDVVPCPDRDSVISRYKAKRKTRRFDRQVRYESRKVR
                *  .*::*.                     :*:*.:**** *:*:**:::::********

AT2G47890.1     AESRTRIRGRFAKAADP
Sb021516_Sorbi1 ADGRLRIKGRFAKANQT
                *:.* **:****** :.
BoxShade v3.31 C (beta, 970507) Output
AT2G47890.1     - - - - - - - - - - - - - - - - M E A E E G H Q R D R L - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb021516_Sorbi1    A Q S H D P A V T C H R K S N A M G E D D D D Q R N Q M L G A G L D H E P E R R P G E A E P E E G K K P A A S E A E A G
 
AT2G47890.1     - - - - - - - - - - C D Y C D S S V A L V Y C K A D S A K L C L A C D K Q V H V A N Q L F A K H F R S L L C D S C N E S
Sb021516_Sorbi1    G D G A G T E A A T C D Y C G T A A A A V Y C R A D S A R L C L P C D R L V H G A N G V C S R H A R A P L C A D C R A A
 
AT2G47890.1     P S S L F C E T E R S V L C Q N C D W Q H H T - - A S S S L H S R R P F E G F T G C P S V P E L L A I V G L - - - - D D
Sb021516_Sorbi1    G A V F R R A S S S A F L C S N C D F G R H R D G G D P P L H D R C A V Q P Y S G C P P A S D L A A L L G V P L F D K P
 
AT2G47890.1     L T L D S G L - - - L W E S P E I V S L N D L I V S G G S G T H N F R A T D V P P L P K N R H A T C - G K Y K D E M I R
Sb021516_Sorbi1    A T E D G G A W W N I W E E P Q V L S L E D L I V P - T T P C H G F E P L L T P S S P K N R S I S P D G K M N E E I L R
 
AT2G47890.1     Q L R G L S R S E P G C - L K F E T P D A E I D A G F Q F L A P D L F S T C E L E S G L K W F - D Q Q D H E D F P Y C S
Sb021516_Sorbi1    Q L G E L A E S D G G V Q A S A G R E E A E Q A G G D Q F P S - - - W A S P Q Y A T G H G N F G T E N N H E - - - V A T
 
AT2G47890.1     L L K N L S E S D E K P E N V D R E - - - - - - - - - - S S V M V P V S G - - - C L N R C E E E T V M V P V I T S T R S
Sb021516_Sorbi1    M P T P L Y E N G - R W N N C D L D A L N D A C K V E V A Y D Q V P V S S A E P C L S S F A P L S E I C P S I S N G N S
 
AT2G47890.1     M - - T H E I N S - - - - - - - - - - - - - - - - - - - - L E R N S A L S R Y K E K K K S R R Y E K H I R Y E S R K V R
Sb021516_Sorbi1    M E D N H Q V N P G I G M P M Q G L P K R T G F D V V P C P D R D S V I S R Y K A K R K T R R F D R Q V R Y E S R K V R
 
AT2G47890.1     A E S R T R I R G R F A K A A D P
Sb021516_Sorbi1    A D G R L R I K G R F A K A N Q T
 
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