fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G47900.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb032660 ACQGAALRLSLAFLDS in 197/692 AT1G25280.1 1st_not 0.570351758 II
SPLIMGLSLMLAGQAE in 382/692
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G47900.1     ---MSFKSLIQDMRGELGSISRKGFDVRFG-------YGRSRSQRVVQ---DTSVPVDAF
Sb032660_Sorbi1 LAKMSFRSIVRDVRDSFGSLSRRSFEVTIAGLSGLTVHHRGKSQSTVHEVCDTDLII---
                   ***:*:::*:*..:**:**:.*:* :.       : *.:** .*:   **.: :   

AT2G47900.1     KQSCWASMPPELLRDVLMRIEQSEDTWPSRKNVVSCAGVCRNWREIVKEIVRVPELSSKL
Sb032660_Sorbi1 QESRWANLPPELLRDVIRRLEASESTWPNRKHVVSCAAVCRAWREMCREIVLSPEFCGKL
                ::* **.:********: *:* **.***.**:*****.*** ***: :***  **:..**

AT2G47900.1     TFPISLKQPGPRGSLVQCYIMRNRSNQTYYLYLGLNQAASNDDGKFLLAAKRFRRPTCTD
Sb032660_Sorbi1 TFPVSLKQPGPRDGMIQCFIKRDKSKSTYHLYLCLSTAVLMENGKFLLSAKRNRKTTCTE
                ***:********..::**:* *::*:.**:*** *. *.  ::*****:*** *:.***:

AT2G47900.1     YIISLNCDDVSRGSNTYIGKLRSNFLGTKFTVYDAQPTNPGTQVTRT-RSSRLLSLKQVS
Sb032660_Sorbi1 YVISMDAENISRSSSTYIGKLRSNFLGTKFMISDTQPPYNGAVVPHAGRTSRRFNSKKVS
                *:**::.:::**.*.*************** : *:**.  *: *.:: *:** :. *:**

AT2G47900.1     PRIPSGNYPVAHISYELNVLGSRGPRRMQCVMDAIPASAVEPGGTAPTQTE--LVHSNLD
Sb032660_Sorbi1 PKVPTGSYNIAQVTYELNVLGTRGPRRMHCVMHSIPASAVEPGGIVPGQPEQILPRALEE
                *::*:*.* :*:::*******:******:***.:********** .* *.*  * ::  :

AT2G47900.1     SFPSFSFFRSKSI----------------RAESLPSGPSSAAQKEGL-----LVLKNKAP
Sb032660_Sorbi1 SFRSTTSFSKSSIMDRSMDFSSSRDFSSARFSDIAGGAAIAGDEEGQNKERPLVLRNKAP
                ** * : * ..**                * ..:..*.: *.::**      ***:****

AT2G47900.1     RWHEQLQCWCLNFNGRVTVASVKNFQLVAAPENGPA----GP---------EHENVILQF
Sb032660_Sorbi1 RWHEQLQCWCLNFRGRVTIASVKNFQLIAAPSPAPAPAARAPTPSSQPVPQDQDKIILQF
                *************.****:********:***. .**    .*         :::::****

AT2G47900.1     GKVGKDVFTMDYQYPISAFQAFTICLSSFDTKIACE
Sb032660_Sorbi1 GKVAKDMFTMDYRYPLSAFQAFAICLSSFDTKLACE
                ***.**:*****:**:******:*********:***
BoxShade v3.31 C (beta, 970507) Output
AT2G47900.1     - - - M S F K S L I Q D M R G E L G S I S R K G F D V R F G - - - - - - - Y G R S R S Q R V V Q - - - D T S V P V D A F
Sb032660_Sorbi1    L A K M S F R S I V R D V R D S F G S L S R R S F E V T I A G L S G L T V H H R G K S Q S T V H E V C D T D L I I - - -
 
AT2G47900.1     K Q S C W A S M P P E L L R D V L M R I E Q S E D T W P S R K N V V S C A G V C R N W R E I V K E I V R V P E L S S K L
Sb032660_Sorbi1    Q E S R W A N L P P E L L R D V I R R L E A S E S T W P N R K H V V S C A A V C R A W R E M C R E I V L S P E F C G K L
 
AT2G47900.1     T F P I S L K Q P G P R G S L V Q C Y I M R N R S N Q T Y Y L Y L G L N Q A A S N D D G K F L L A A K R F R R P T C T D
Sb032660_Sorbi1    T F P V S L K Q P G P R D G M I Q C F I K R D K S K S T Y H L Y L C L S T A V L M E N G K F L L S A K R N R K T T C T E
 
AT2G47900.1     Y I I S L N C D D V S R G S N T Y I G K L R S N F L G T K F T V Y D A Q P T N P G T Q V T R T - R S S R L L S L K Q V S
Sb032660_Sorbi1    Y V I S M D A E N I S R S S S T Y I G K L R S N F L G T K F M I S D T Q P P Y N G A V V P H A G R T S R R F N S K K V S
 
AT2G47900.1     P R I P S G N Y P V A H I S Y E L N V L G S R G P R R M Q C V M D A I P A S A V E P G G T A P T Q T E - - L V H S N L D
Sb032660_Sorbi1    P K V P T G S Y N I A Q V T Y E L N V L G T R G P R R M H C V M H S I P A S A V E P G G I V P G Q P E Q I L P R A L E E
 
AT2G47900.1     S F P S F S F F R S K S I - - - - - - - - - - - - - - - - R A E S L P S G P S S A A Q K E G L - - - - - L V L K N K A P
Sb032660_Sorbi1    S F R S T T S F S K S S I M D R S M D F S S S R D F S S A R F S D I A G G A A I A G D E E G Q N K E R P L V L R N K A P
 
AT2G47900.1     R W H E Q L Q C W C L N F N G R V T V A S V K N F Q L V A A P E N G P A - - - - G P - - - - - - - - - E H E N V I L Q F
Sb032660_Sorbi1    R W H E Q L Q C W C L N F R G R V T I A S V K N F Q L I A A P S P A P A P A A R A P T P S S Q P V P Q D Q D K I I L Q F
 
AT2G47900.1     G K V G K D V F T M D Y Q Y P I S A F Q A F T I C L S S F D T K I A C E
Sb032660_Sorbi1    G K V A K D M F T M D Y R Y P L S A F Q A F A I C L S S F D T K L A C E
 
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