fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G47900.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm004126 not found in 400aa AT2G47900.2 1st_not 0.746231155 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G47900.1     MSFKSLIQDMRGELGSISRKGFDVRFGYG-RSRSQR----VVQDTSVPVDAFKQSCWASM
gm004126_Glyma0 MSFRSII---------LERKGFEVKFGYSMRSRSQSHSDAIAQDSLVVLDGLKQSCWANM
                ***:*:*         :.****:*:***. *****     :.**: * :*.:******.*

AT2G47900.1     PPELLRDVLMRIEQSEDTWPSRKNVVSCAGVCRNWREIVKEIVRVPELSSKLTFPISLKQ
gm004126_Glyma0 PPELLRDVLMRIEASEDSWPAQKHVVACAGVCRSWREIMKEIVKSPQLSGKLTFPISLKQ
                ************* ***:**::*:**:******.****:****: *:**.**********

AT2G47900.1     PGPRGSLVQCYIMRNRSNQTYYLYLGLNQAASNDDGKFLLAAKRFRRPTCTDYIISLNCD
gm004126_Glyma0 PGPRDSLLQCYIKRNRSNQTYYLFLGLNQ-ASTDEGKFLLSARKCRRATHTDYIISLNCD
                ****.**:**** **********:***** **.*:*****:*:: **.* **********

AT2G47900.1     DVSRGSNTYIGKLRSNFLGTKFTVYDAQPTNPGTQVTRTRSSRLLSLKQVSPRIPSGNYP
gm004126_Glyma0 DVSRGSSTYIGKLRSNFLGTKFTVYDAHPPIYGAKVTKSRSTRLVSLKQVSPRVPAGNYP
                ******.********************:*.  *::**::**:**:********:*:****

AT2G47900.1     VAHISYELNVLGSRGPRRMQCVMDAIPASAVEPGGTAPTQTELVHSNLDSFPSFSFFRSK
gm004126_Glyma0 IAHVSYDLNVLGSRGPRIMQCVMDAIPASAVEPGGVAPTQTQFLHSRIDTSPSIPFFRSK
                :**:**:********** *****************.*****:::**.:*: **:.*****

AT2G47900.1     SIRAESLPSGPSSAAQKEGLLVLKNKAPRWHEQLQCWCLNFNGRVTVASVKNFQLVAAPE
gm004126_Glyma0 STRMDNLPTVPLT-CQNEGTLVLRNKSPRWHEHLQCWCLNFNGRVTVASVKNFQLVASPK
                * * :.**: * : .*:** ***:**:*****:************************:*:

AT2G47900.1     NGPAGPEHENVILQFGKVGKDVFTMDYQYPISAFQAFTICLSSFDTKIACE
gm004126_Glyma0 NGVSEQAQENVILQFGKVGKDVFTMDYQYPISAFQAFAICLSSFDTKIACE
                ** :   :*****************************:*************
BoxShade v3.31 C (beta, 970507) Output
AT2G47900.1     M S F K S L I Q D M R G E L G S I S R K G F D V R F G Y G - R S R S Q R - - - - V V Q D T S V P V D A F K Q S C W A S M
gm004126_Glyma0    M S F R S I I - - - - - - - - - L E R K G F E V K F G Y S M R S R S Q S H S D A I A Q D S L V V L D G L K Q S C W A N M
 
AT2G47900.1     P P E L L R D V L M R I E Q S E D T W P S R K N V V S C A G V C R N W R E I V K E I V R V P E L S S K L T F P I S L K Q
gm004126_Glyma0    P P E L L R D V L M R I E A S E D S W P A Q K H V V A C A G V C R S W R E I M K E I V K S P Q L S G K L T F P I S L K Q
 
AT2G47900.1     P G P R G S L V Q C Y I M R N R S N Q T Y Y L Y L G L N Q A A S N D D G K F L L A A K R F R R P T C T D Y I I S L N C D
gm004126_Glyma0    P G P R D S L L Q C Y I K R N R S N Q T Y Y L F L G L N Q - A S T D E G K F L L S A R K C R R A T H T D Y I I S L N C D
 
AT2G47900.1     D V S R G S N T Y I G K L R S N F L G T K F T V Y D A Q P T N P G T Q V T R T R S S R L L S L K Q V S P R I P S G N Y P
gm004126_Glyma0    D V S R G S S T Y I G K L R S N F L G T K F T V Y D A H P P I Y G A K V T K S R S T R L V S L K Q V S P R V P A G N Y P
 
AT2G47900.1     V A H I S Y E L N V L G S R G P R R M Q C V M D A I P A S A V E P G G T A P T Q T E L V H S N L D S F P S F S F F R S K
gm004126_Glyma0    I A H V S Y D L N V L G S R G P R I M Q C V M D A I P A S A V E P G G V A P T Q T Q F L H S R I D T S P S I P F F R S K
 
AT2G47900.1     S I R A E S L P S G P S S A A Q K E G L L V L K N K A P R W H E Q L Q C W C L N F N G R V T V A S V K N F Q L V A A P E
gm004126_Glyma0    S T R M D N L P T V P L T - C Q N E G T L V L R N K S P R W H E H L Q C W C L N F N G R V T V A S V K N F Q L V A S P K
 
AT2G47900.1     N G P A G P E H E N V I L Q F G K V G K D V F T M D Y Q Y P I S A F Q A F T I C L S S F D T K I A C E
gm004126_Glyma0    N G V S E Q A Q E N V I L Q F G K V G K D V F T M D Y Q Y P I S A F Q A F A I C L S S F D T K I A C E
 
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