fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G48100.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt038564 SAQGCDLCLKLYDSPS in 83/357 AT2G48100.3 1st_not 0.527121001 II
Get sequence file
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G48100.1     MDSQLNPSKRRKISVRHRCVACYKMFNRREHLVEHMKISYHSLHQPRCGVCLKHCKSFES
pt038564_POPTR_ MDAEADPPTRSRTE-RHKCFACYKQFKKKEHLVEHMKISYHTPHQPKCGVCQKHCKSFES
                **:: :*..* : . **:*.**** *:::************: ***:**** ********

AT2G48100.1     VREHLNVPDHLSKGNCKAIFTKRGCTLCLQIFEEAFALAEHKNKCHLSPPRPLGTSTQRN
pt038564_POPTR_ LRNHLTGP--LSRAGCSRTFSAQGCDLCLKLYDSPSSLGKHREICHLSAPASLGTKIL--
                :*:**. *  **:..*.  *: :** ***::::.. :*.:*:: ****.* .***.    

AT2G48100.1     PSSSLAGS--------RLKAMALDCEMVGGGADGTIDQCASVCLVDDDENVIFSTHVQPL
pt038564_POPTR_ ---PFAGSVDVKYTTKGAKAIAINCGLVGGGTDGSLDLCARVCLVDEDENIIFHTYVQPQ
                   .:***          **:*::* :****:**::* ** *****:***:** *:*** 

AT2G48100.1     LPVTDYRHEITGLTKEDLKDGMPLEHVRERVFSFLCGGQ------NDGAGRLLLVGHDLR
pt038564_POPTR_ SAVTDYRYEITGLTEEHLRNSKSHKEVQDRILEILYNGESARRLMSDSGKARLLVGHDLK
                 .*****:******:*.*::. . :.*::*::.:* .*:      .*..   *******:

AT2G48100.1     HDMSCLKLEYPSHLLRDTAKYVPLMKTNLVSQSLKYLTKSYLGYKIQCGKHEVYEDCVSA
pt038564_POPTR_ RGLDCLRINYPGHLLRDTAKYRPLLKTNLVSHSLKYLTKTYLGYDIQTGEHDPYVDCVSV
                :.:.**:::**.********* **:******:*******:****.** *:*: * ****.

AT2G48100.1     MRLYKRMRDQEHVCSGKAEG-----NGLNSRKQSDLEKMNAEELYQKSTSEYRCWCLDR-
pt038564_POPTR_ MRLYKRMRAQDH--QGKGIGTPNSDSGFESQKAEELENMTPDELYQISKSDYKCWCLDSS
                ******** *:*  .**. *     .*::*:* .:**:*..:**** *.*:*:*****  

AT2G48100.1     ----LSNP
pt038564_POPTR_ IAAGLNS-
                    *..
BoxShade v3.31 C (beta, 970507) Output
AT2G48100.1     M D S Q L N P S K R R K I S V R H R C V A C Y K M F N R R E H L V E H M K I S Y H S L H Q P R C G V C L K H C K S F E S
pt038564_POPTR_    M D A E A D P P T R S R T E - R H K C F A C Y K Q F K K K E H L V E H M K I S Y H T P H Q P K C G V C Q K H C K S F E S
 
AT2G48100.1     V R E H L N V P D H L S K G N C K A I F T K R G C T L C L Q I F E E A F A L A E H K N K C H L S P P R P L G T S T Q R N
pt038564_POPTR_    L R N H L T G P - - L S R A G C S R T F S A Q G C D L C L K L Y D S P S S L G K H R E I C H L S A P A S L G T K I L - -
 
AT2G48100.1     P S S S L A G S - - - - - - - - R L K A M A L D C E M V G G G A D G T I D Q C A S V C L V D D D E N V I F S T H V Q P L
pt038564_POPTR_    - - - P F A G S V D V K Y T T K G A K A I A I N C G L V G G G T D G S L D L C A R V C L V D E D E N I I F H T Y V Q P Q
 
AT2G48100.1     L P V T D Y R H E I T G L T K E D L K D G M P L E H V R E R V F S F L C G G Q - - - - - - N D G A G R L L L V G H D L R
pt038564_POPTR_    S A V T D Y R Y E I T G L T E E H L R N S K S H K E V Q D R I L E I L Y N G E S A R R L M S D S G K A R L L V G H D L K
 
AT2G48100.1     H D M S C L K L E Y P S H L L R D T A K Y V P L M K T N L V S Q S L K Y L T K S Y L G Y K I Q C G K H E V Y E D C V S A
pt038564_POPTR_    R G L D C L R I N Y P G H L L R D T A K Y R P L L K T N L V S H S L K Y L T K T Y L G Y D I Q T G E H D P Y V D C V S V
 
AT2G48100.1     M R L Y K R M R D Q E H V C S G K A E G - - - - - N G L N S R K Q S D L E K M N A E E L Y Q K S T S E Y R C W C L D R -
pt038564_POPTR_    M R L Y K R M R A Q D H - - Q G K G I G T P N S D S G F E S Q K A E E L E N M T P D E L Y Q I S K S D Y K C W C L D S S
 
AT2G48100.1     - - - - L S N P
pt038564_POPTR_    I A A G L N S -
 
0