fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G48100.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt038564 SAQGCDLCLKLYDSPS in 83/357 AT2G48100.3 1st_not 0.527121001 II
Pt038565 SAQGCDLCLKLYDSPS in 83/349 AT2G48100.3 not_not 0.496522948 III
Pt003414 not found in 336aa AT3G27970.1 not_not 0.450625869 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT2G48100.1     MDSQLNPSKRRKISVRHRCVACYKMFNRREHLVEHMKISYHSLHQPRCGVCLKHCKSFES
pt038565_POPTR_ MDAEADPPTRSRTE-RHKCFACYKQFKKKEHLVEHMKISYHTPHQPKCGVCQKHCKSFES
pt003414_POPTR_ MESR---NESSEIS-RNKCAACFRQFNKMEHLVEHMRISYHSVHEPMCGICKKHCRSYES
pt038564_POPTR_ MDAEADPPTRSRTE-RHKCFACYKQFKKKEHLVEHMKISYHTPHQPKCGVCQKHCKSFES
                *::.       . . *::* **:: *:: *******:****: *:* **:* ***:*:**

AT2G48100.1     VREHLNVPDHLSKGNCKAIFTKRGCTLCLQIFEEAFALAEHKNKCHLSPPRPLGTSTQRN
pt038565_POPTR_ LRNHLTGP--LSRAGCSRTFSAQGCDLCLKLYDSPSSLGKHREICHLSAPASLGTKIL--
pt003414_POPTR_ LREHVIGP--LPKQECKNIFSIRGCKFCLTILDSPNARRVHQERCQLS-----GLRDNLT
pt038564_POPTR_ LRNHLTGP--LSRAGCSRTFSAQGCDLCLKLYDSPSSLGKHREICHLSAPASLGTKIL--
                :*:*:  *  *.:  *.  *: :** :** : :.. :   *:: *:**     *      

AT2G48100.1     PSSSLAGS--------RLKAMALDCEMVGGGADGTIDQCASVCLVDDDENVIFSTHVQPL
pt038565_POPTR_ ---PFAGSVDVKYTTKGAKAIAINCGLVGGGTDGSLDLCARVCLVDEDENIIFHTYVQPQ
pt003414_POPTR_ IDNGYA---------RGRQVVALACKMVGGGSDGSIDLCARVCLIDENENIIFHTYVKPP
pt038564_POPTR_ ---PFAGSVDVKYTTKGAKAIAINCGLVGGGTDGSLDLCARVCLVDEDENIIFHTYVQPQ
                     *            :.:*: * :****:**::* ** ***:*::**:** *:*:* 

AT2G48100.1     LPVTDYRHEITGLTKEDLKDGMPLEHVRERVFSFLCGGQ------NDGAGRLLLVGHDLR
pt038565_POPTR_ SAVTDYRYEITGLTEEHLRNSKSHKEVQDRILEILYNGESARRLMSDSGKARLLVGHDLK
pt003414_POPTR_ IPVTNYRYETTGIRPEYLRDATPLRQVQKKIQDFLCNGEPTWKIRPRGGKARILVGHDLD
pt038564_POPTR_ SAVTDYRYEITGLTEEHLRNSKSHKEVQDRILEILYNGESARRLMSDSGKARLLVGHDLK
                 .**:**:* **:  * *::. . ..*:.:: .:* .*:        ..   :****** 

AT2G48100.1     HDMSCLKLEYPSHLLRDTAKYVPLMKTNLVSQSLKYLTKSYLGYKIQCGKHEVYEDCVSA
pt038565_POPTR_ RGLDCLRINYPGHLLRDTAKYRPLLKTNLVSHSLK--------YDIQTGEHDPYVDCVSV
pt003414_POPTR_ R----LQLEYPAVMMRDTAKYPPLMKTSKLSNSLKYLTQAYLGYDIQTGMQDPYEDCVAT
pt038564_POPTR_ RGLDCLRINYPGHLLRDTAKYRPLLKTNLVSHSLKYLTKTYLGYDIQTGEHDPYVDCVSV
                :    *:::**. ::****** **:**. :*:***        *.** * :: * ***:.

AT2G48100.1     MRLYKRMRDQEHVCSGKAEG------NGLNSRKQSDLEKMNAEELYQKSTSEYRCWCLDR
pt038565_POPTR_ MRLYKRMRAQDH--QGKGIGT-PNSDSGFESQKAEELENMTPDELYQISKSDYKCWCLDS
pt003414_POPTR_ MRLYIRMRSQNHTIEDYPLAFDPQNRNNFASWRQSELERMSPEEMFAISRSDYYCWCLDS
pt038564_POPTR_ MRLYKRMRAQDH--QGKGIGT-PNSDSGFESQKAEELENMTPDELYQISKSDYKCWCLDS
                **** *** *:*  ..   .      ..: * : .:**.*..:*::  * *:* ***** 

AT2G48100.1     -----LSNP
pt038565_POPTR_ SIAAGLNS-
pt003414_POPTR_ ---------
pt038564_POPTR_ SIAAGLNS-
BoxShade v3.31 C (beta, 970507) Output
AT2G48100.1     M D S Q L N P S K R R K I S V R H R C V A C Y K M F N R R E H L V E H M K I S Y H S L H Q P R C G V C L K H C K S F E S
pt038565_POPTR_    M D A E A D P P T R S R T E - R H K C F A C Y K Q F K K K E H L V E H M K I S Y H T P H Q P K C G V C Q K H C K S F E S
pt003414_POPTR_    M E S R - - - N E S S E I S - R N K C A A C F R Q F N K M E H L V E H M R I S Y H S V H E P M C G I C K K H C R S Y E S
pt038564_POPTR_    M D A E A D P P T R S R T E - R H K C F A C Y K Q F K K K E H L V E H M K I S Y H T P H Q P K C G V C Q K H C K S F E S
 
AT2G48100.1     V R E H L N V P D H L S K G N C K A I F T K R G C T L C L Q I F E E A F A L A E H K N K C H L S P P R P L G T S T Q R N
pt038565_POPTR_    L R N H L T G P - - L S R A G C S R T F S A Q G C D L C L K L Y D S P S S L G K H R E I C H L S A P A S L G T K I L - -
pt003414_POPTR_    L R E H V I G P - - L P K Q E C K N I F S I R G C K F C L T I L D S P N A R R V H Q E R C Q L S - - - - - G L R D N L T
pt038564_POPTR_    L R N H L T G P - - L S R A G C S R T F S A Q G C D L C L K L Y D S P S S L G K H R E I C H L S A P A S L G T K I L - -
 
AT2G48100.1     P S S S L A G S - - - - - - - - R L K A M A L D C E M V G G G A D G T I D Q C A S V C L V D D D E N V I F S T H V Q P L
pt038565_POPTR_    - - - P F A G S V D V K Y T T K G A K A I A I N C G L V G G G T D G S L D L C A R V C L V D E D E N I I F H T Y V Q P Q
pt003414_POPTR_    I D N G Y A - - - - - - - - - R G R Q V V A L A C K M V G G G S D G S I D L C A R V C L I D E N E N I I F H T Y V K P P
pt038564_POPTR_    - - - P F A G S V D V K Y T T K G A K A I A I N C G L V G G G T D G S L D L C A R V C L V D E D E N I I F H T Y V Q P Q
 
AT2G48100.1     L P V T D Y R H E I T G L T K E D L K D G M P L E H V R E R V F S F L C G G Q - - - - - - N D G A G R L L L V G H D L R
pt038565_POPTR_    S A V T D Y R Y E I T G L T E E H L R N S K S H K E V Q D R I L E I L Y N G E S A R R L M S D S G K A R L L V G H D L K
pt003414_POPTR_    I P V T N Y R Y E T T G I R P E Y L R D A T P L R Q V Q K K I Q D F L C N G E P T W K I R P R G G K A R I L V G H D L D
pt038564_POPTR_    S A V T D Y R Y E I T G L T E E H L R N S K S H K E V Q D R I L E I L Y N G E S A R R L M S D S G K A R L L V G H D L K
 
AT2G48100.1     H D M S C L K L E Y P S H L L R D T A K Y V P L M K T N L V S Q S L K Y L T K S Y L G Y K I Q C G K H E V Y E D C V S A
pt038565_POPTR_    R G L D C L R I N Y P G H L L R D T A K Y R P L L K T N L V S H S L K - - - - - - - - Y D I Q T G E H D P Y V D C V S V
pt003414_POPTR_    R - - - - L Q L E Y P A V M M R D T A K Y P P L M K T S K L S N S L K Y L T Q A Y L G Y D I Q T G M Q D P Y E D C V A T
pt038564_POPTR_    R G L D C L R I N Y P G H L L R D T A K Y R P L L K T N L V S H S L K Y L T K T Y L G Y D I Q T G E H D P Y V D C V S V
 
AT2G48100.1     M R L Y K R M R D Q E H V C S G K A E G - - - - - - N G L N S R K Q S D L E K M N A E E L Y Q K S T S E Y R C W C L D R
pt038565_POPTR_    M R L Y K R M R A Q D H - - Q G K G I G T - P N S D S G F E S Q K A E E L E N M T P D E L Y Q I S K S D Y K C W C L D S
pt003414_POPTR_    M R L Y I R M R S Q N H T I E D Y P L A F D P Q N R N N F A S W R Q S E L E R M S P E E M F A I S R S D Y Y C W C L D S
pt038564_POPTR_    M R L Y K R M R A Q D H - - Q G K G I G T - P N S D S G F E S Q K A E E L E N M T P D E L Y Q I S K S D Y K C W C L D S
 
AT2G48100.1     - - - - - L S N P
pt038565_POPTR_    S I A A G L N S -
pt003414_POPTR_    - - - - - - - - -
pt038564_POPTR_    S I A A G L N S -
 
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