fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G48100.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb010965 not found in 336aa AT3G27970.1 1st_not 0.465924895 II
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G48100.1     -MDSQLNPSKRRKISVRHRCVACYKMFNRREHLVEHMKISYHSLHQPRCGVCLKHCKSFE
Sb010965_Sorbi1 MVDSRRESSE----TLRNKCAACFRQYNRMEHLVEHMKVSYHSVHEPKCGVCRKHCRSFE
                 :**: :.*:    ::*::*.**:: :** ********:****:*:*:**** ***:***

AT2G48100.1     SVREHLNVPDHLSKGNCKAIFTKRGCTLCLQIFEEAFALAEHKNKCHLSPPRPLGTSTQR
Sb010965_Sorbi1 SLREHLIGP--LPKVECARVFSVRGCSICLNIFDSNATVRYHRAACQYSRAAPM------
                *:****  *  *.* :*  :*: ***::**:**:.  ::  *:  *: * . *:      

AT2G48100.1     NPSSSLAGSRLKAMALDCEMVGGGADGTIDQCASVCLVDDDENVIFSTHVQPLLPVTDYR
Sb010965_Sorbi1 -PRGGITG---RAVALACKMVGGGSDGSMDLCAKVCLIGEDEHIIFQTYVKPILPVTNYR
                 * ..::*   :*:** *:*****:**::* **.***:.:**::**.*:*:*:****:**

AT2G48100.1     HEITGLTKEDLKDGMPLEHVRERVFSFLCGGQ------NDGAGRL-LLVGHDLRHDMSCL
Sb010965_Sorbi1 YEVTGIRPEYLRDAMPLKVAQRRIQEILCNGEPLWKLRPRSYGRAKILVGHGLDHDLERL
                :*:**:  * *:*.***: .:.*: .:**.*:        . **  :****.* **:. *

AT2G48100.1     KLEYPSHLLRDTAKYVPLMKTNLVSQSLKYLTKSYLGYKIQCGKHEVYEDCVSAMRLYKR
Sb010965_Sorbi1 GLEYPAFMIRDTAKYPPLVKTSKLSNSLKYLTQAYLGYDIHTGIQDPYEDCVAAMRLYIR
                 ****:.::****** **:**. :*:******::****.*: * :: *****:***** *

AT2G48100.1     MRDQEH-----VCSGKAEGNGLNSRKQSDLEKMNAEELYQKSTSEYRCWCLDRLSNP
Sb010965_Sorbi1 MRSQAHPRDYNSGSGEAQ-NNYPAWRQRELERMSPEELLALSASDYYCWCLDY----
                **.* *       **:*: *.  : :* :**:*..***   *:*:* *****
BoxShade v3.31 C (beta, 970507) Output
AT2G48100.1     - M D S Q L N P S K R R K I S V R H R C V A C Y K M F N R R E H L V E H M K I S Y H S L H Q P R C G V C L K H C K S F E
Sb010965_Sorbi1    M V D S R R E S S E - - - - T L R N K C A A C F R Q Y N R M E H L V E H M K V S Y H S V H E P K C G V C R K H C R S F E
 
AT2G48100.1     S V R E H L N V P D H L S K G N C K A I F T K R G C T L C L Q I F E E A F A L A E H K N K C H L S P P R P L G T S T Q R
Sb010965_Sorbi1    S L R E H L I G P - - L P K V E C A R V F S V R G C S I C L N I F D S N A T V R Y H R A A C Q Y S R A A P M - - - - - -
 
AT2G48100.1     N P S S S L A G S R L K A M A L D C E M V G G G A D G T I D Q C A S V C L V D D D E N V I F S T H V Q P L L P V T D Y R
Sb010965_Sorbi1    - P R G G I T G - - - R A V A L A C K M V G G G S D G S M D L C A K V C L I G E D E H I I F Q T Y V K P I L P V T N Y R
 
AT2G48100.1     H E I T G L T K E D L K D G M P L E H V R E R V F S F L C G G Q - - - - - - N D G A G R L - L L V G H D L R H D M S C L
Sb010965_Sorbi1    Y E V T G I R P E Y L R D A M P L K V A Q R R I Q E I L C N G E P L W K L R P R S Y G R A K I L V G H G L D H D L E R L
 
AT2G48100.1     K L E Y P S H L L R D T A K Y V P L M K T N L V S Q S L K Y L T K S Y L G Y K I Q C G K H E V Y E D C V S A M R L Y K R
Sb010965_Sorbi1    G L E Y P A F M I R D T A K Y P P L V K T S K L S N S L K Y L T Q A Y L G Y D I H T G I Q D P Y E D C V A A M R L Y I R
 
AT2G48100.1     M R D Q E H - - - - - V C S G K A E G N G L N S R K Q S D L E K M N A E E L Y Q K S T S E Y R C W C L D R L S N P
Sb010965_Sorbi1    M R S Q A H P R D Y N S G S G E A Q - N N Y P A W R Q R E L E R M S P E E L L A L S A S D Y Y C W C L D Y - - - -
 
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