fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G48100.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb007537 not found in 361aa AT5G40310.1 not_not 0.420027816 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G48100.1     MDSQLNPSKRRKISVRHRCVACYKMFNRREHLVEHMKISYHSLHQPRCGVCLKHCKSFES
Sb007537_Sorbi1 MDSASDAHG------RHKCAACFRQFNKMEHLVEHMRAARHSSHEPRCDICRKHCRSFEA
                ***  :.        **:*.**:: **: *******: : ** *:***.:* ***:***:

AT2G48100.1     VREHLNV-PDHLSKGN-CKAIFTKRGCTLCLQIFEEAFALAEHKNKCHLS--PPRPLGTS
Sb007537_Sorbi1 LRDHLGVGGSTLPKAAYCADAFAARGCTICLRVLASAAALGAHSAACRLSRIPPPMMSRA
                :*:**.*  . *.*.  *   *: ****:**::: .* **. *.  *:**  **  :. :

AT2G48100.1     TQRN--PSSSL---AGSRLKAMALDCEMVGGGADGTIDQCASVCLVDDDENVIFSTHVQP
Sb007537_Sorbi1 LQHHQLPAATQPHGGGGEGGALALGCKMVGAGSDGSLDVCARVCVIDEQENILFEAFVKP
                 *::  *:::    .*..  *:**.*:***.*:**::* ** **::*::**::*.:.*:*

AT2G48100.1     LLPVTDYRHEITGLTKEDLKDG--MPLEHVRERVFSFLCGGQ-------NDGAGRLLLVG
Sb007537_Sorbi1 LLPVTHYRYETTGIRPEHLRDGASTTVKNAQRRVEELLLNGEQPWKVRTSRGRAR-LLVG
                *****.**:* **:  *.*:**   .:::.:.** .:* .*:       . * .* ****

AT2G48100.1     HDLRHDMSCLKLEYPSHLLRDTAKYVPLMKTNLVSQSLKYLTKSYLGYKIQCGKHEVYED
Sb007537_Sorbi1 HGLDHDLDALGMDYPGYLKRDTATYPPLMKTSKLSNSLRFLTHKYLGYDIQTGHQHPFED
                *.* **:..* ::**.:* ****.* *****. :*:**::**:.****.** *::. :**

AT2G48100.1     CVSAMRLYKRMR-DQEHVCSGKAEGN---------GLNSRKQSDLEKMNAEELYQKSTSE
Sb007537_Sorbi1 CVAAMRLYRRMRGQQQHPRGGGGDADAPAAATADQAFPAWRQRELERMTPEELLRLSTPD
                **:*****:*** :*:*  .* .:.:         .: : :* :**:*..*** : **.:

AT2G48100.1     YRCWCLDRLSNP
Sb007537_Sorbi1 YRCWCLDA----
                *******
BoxShade v3.31 C (beta, 970507) Output
AT2G48100.1     M D S Q L N P S K R R K I S V R H R C V A C Y K M F N R R E H L V E H M K I S Y H S L H Q P R C G V C L K H C K S F E S
Sb007537_Sorbi1    M D S A S D A H G - - - - - - R H K C A A C F R Q F N K M E H L V E H M R A A R H S S H E P R C D I C R K H C R S F E A
 
AT2G48100.1     V R E H L N V - P D H L S K G N - C K A I F T K R G C T L C L Q I F E E A F A L A E H K N K C H L S - - P P R P L G T S
Sb007537_Sorbi1    L R D H L G V G G S T L P K A A Y C A D A F A A R G C T I C L R V L A S A A A L G A H S A A C R L S R I P P P M M S R A
 
AT2G48100.1     T Q R N - - P S S S L - - - A G S R L K A M A L D C E M V G G G A D G T I D Q C A S V C L V D D D E N V I F S T H V Q P
Sb007537_Sorbi1    L Q H H Q L P A A T Q P H G G G G E G G A L A L G C K M V G A G S D G S L D V C A R V C V I D E Q E N I L F E A F V K P
 
AT2G48100.1     L L P V T D Y R H E I T G L T K E D L K D G - - M P L E H V R E R V F S F L C G G Q - - - - - - - N D G A G R L L L V G
Sb007537_Sorbi1    L L P V T H Y R Y E T T G I R P E H L R D G A S T T V K N A Q R R V E E L L L N G E Q P W K V R T S R G R A R - L L V G
 
AT2G48100.1     H D L R H D M S C L K L E Y P S H L L R D T A K Y V P L M K T N L V S Q S L K Y L T K S Y L G Y K I Q C G K H E V Y E D
Sb007537_Sorbi1    H G L D H D L D A L G M D Y P G Y L K R D T A T Y P P L M K T S K L S N S L R F L T H K Y L G Y D I Q T G H Q H P F E D
 
AT2G48100.1     C V S A M R L Y K R M R - D Q E H V C S G K A E G N - - - - - - - - - G L N S R K Q S D L E K M N A E E L Y Q K S T S E
Sb007537_Sorbi1    C V A A M R L Y R R M R G Q Q Q H P R G G G G D A D A P A A A T A D Q A F P A W R Q R E L E R M T P E E L L R L S T P D
 
AT2G48100.1     Y R C W C L D R L S N P
Sb007537_Sorbi1    Y R C W C L D A - - - -
 
0