fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G48100.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb010965 not found in 336aa AT3G27970.1 1st_not 0.465924895 II
Sb007537 not found in 361aa AT5G40310.1 not_not 0.420027816 III
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT2G48100.1     -MDSQLNPSKRRKISVRHRCVACYKMFNRREHLVEHMKISYHSLHQPRCGVCLKHCKSFE
Sb007537_Sorbi1 -MDSASDAHG------RHKCAACFRQFNKMEHLVEHMRAARHSSHEPRCDICRKHCRSFE
Sb010965_Sorbi1 MVDSRRESSET----LRNKCAACFRQYNRMEHLVEHMKVSYHSVHEPKCGVCRKHCRSFE
                 :**  :.        *::*.**:: :*: *******: : ** *:*:*.:* ***:***

AT2G48100.1     SVREHLNVP-DHLSKGN-CKAIFTKRGCTLCLQIFEEAFALAEHKNKCHLSPPRP--LGT
Sb007537_Sorbi1 ALRDHLGVGGSTLPKAAYCADAFAARGCTICLRVLASAAALGAHSAACRLSRIPPPMMSR
Sb010965_Sorbi1 SLREHL-IG--PLPKVE-CARVFSVRGCSICLNIFDSNATVRYHRAACQYSRAAP--MPR
                ::*:** :    *.*   *   *: ***::**.:: .  ::  *   *: *   *  :  

AT2G48100.1     STQRN--PSSSL---AGSRLKAMALDCEMVGGGADGTIDQCASVCLVDDDENVIFSTHVQ
Sb007537_Sorbi1 ALQHHQLPAATQPHGGGGEGGALALGCKMVGAGSDGSLDVCARVCVIDEQENILFEAFVK
Sb010965_Sorbi1 ---------------GGITGRAVALACKMVGGGSDGSMDLCAKVCLIGEDEHIIFQTYVK
                               .*    *:** *:***.*:**::* ** **::.::*:::*.:.*:

AT2G48100.1     PLLPVTDYRHEITGLTKEDLKD--GMPLEHVRERVFSFLCGGQ--------NDGAGRLLL
Sb007537_Sorbi1 PLLPVTHYRYETTGIRPEHLRDGASTTVKNAQRRVEELLLNGEQPWKVRT-SRGRAR-LL
Sb010965_Sorbi1 PILPVTNYRYEVTGIRPEYLRD--AMPLKVAQRRIQEILCNGEPLWKLRPRSYGRAK-IL
                *:****.**:* **:  * *:*  . .:: .:.*: .:* .*:        . * .: :*

AT2G48100.1     VGHDLRHDMSCLKLEYPSHLLRDTAKYVPLMKTNLVSQSLKYLTKSYLGYKIQCGKHEVY
Sb007537_Sorbi1 VGHGLDHDLDALGMDYPGYLKRDTATYPPLMKTSKLSNSLRFLTHKYLGYDIQTGHQHPF
Sb010965_Sorbi1 VGHGLDHDLERLGLEYPAFMIRDTAKYPPLVKTSKLSNSLKYLTQAYLGYDIHTGIQDPY
                ***.* **:. * ::**..: ****.* **:**. :*:**::**: ****.*: * :. :

AT2G48100.1     EDCVSAMRLYKRMR-DQEHVC---SGKAE---------GNGLNSRKQSDLEKMNAEELYQ
Sb007537_Sorbi1 EDCVAAMRLYRRMRGQQQHPR---GGGGDADAPAAATADQAFPAWRQRELERMTPEELLR
Sb010965_Sorbi1 EDCVAAMRLYIRMR-SQAHPRDYNSGSGE--------AQNNYPAWRQRELERMSPEELLA
                ****:***** *** .* *     .* .:          :   : :* :**:*..***  

AT2G48100.1     KSTSEYRCWCLDRLSNP
Sb007537_Sorbi1 LSTPDYRCWCLDA----
Sb010965_Sorbi1 LSASDYYCWCLDY----
                 *:.:* *****
BoxShade v3.31 C (beta, 970507) Output
AT2G48100.1     - M D S Q L N P S K R R K I S V R H R C V A C Y K M F N R R E H L V E H M K I S Y H S L H Q P R C G V C L K H C K S F E
Sb007537_Sorbi1    - M D S A S D A H G - - - - - - R H K C A A C F R Q F N K M E H L V E H M R A A R H S S H E P R C D I C R K H C R S F E
Sb010965_Sorbi1    M V D S R R E S S E T - - - - L R N K C A A C F R Q Y N R M E H L V E H M K V S Y H S V H E P K C G V C R K H C R S F E
 
AT2G48100.1     S V R E H L N V P - D H L S K G N - C K A I F T K R G C T L C L Q I F E E A F A L A E H K N K C H L S P P R P - - L G T
Sb007537_Sorbi1    A L R D H L G V G G S T L P K A A Y C A D A F A A R G C T I C L R V L A S A A A L G A H S A A C R L S R I P P P M M S R
Sb010965_Sorbi1    S L R E H L - I G - - P L P K V E - C A R V F S V R G C S I C L N I F D S N A T V R Y H R A A C Q Y S R A A P - - M P R
 
AT2G48100.1     S T Q R N - - P S S S L - - - A G S R L K A M A L D C E M V G G G A D G T I D Q C A S V C L V D D D E N V I F S T H V Q
Sb007537_Sorbi1    A L Q H H Q L P A A T Q P H G G G G E G G A L A L G C K M V G A G S D G S L D V C A R V C V I D E Q E N I L F E A F V K
Sb010965_Sorbi1    - - - - - - - - - - - - - - - G G I T G R A V A L A C K M V G G G S D G S M D L C A K V C L I G E D E H I I F Q T Y V K
 
AT2G48100.1     P L L P V T D Y R H E I T G L T K E D L K D - - G M P L E H V R E R V F S F L C G G Q - - - - - - - - N D G A G R L L L
Sb007537_Sorbi1    P L L P V T H Y R Y E T T G I R P E H L R D G A S T T V K N A Q R R V E E L L L N G E Q P W K V R T - S R G R A R - L L
Sb010965_Sorbi1    P I L P V T N Y R Y E V T G I R P E Y L R D - - A M P L K V A Q R R I Q E I L C N G E P L W K L R P R S Y G R A K - I L
 
AT2G48100.1     V G H D L R H D M S C L K L E Y P S H L L R D T A K Y V P L M K T N L V S Q S L K Y L T K S Y L G Y K I Q C G K H E V Y
Sb007537_Sorbi1    V G H G L D H D L D A L G M D Y P G Y L K R D T A T Y P P L M K T S K L S N S L R F L T H K Y L G Y D I Q T G H Q H P F
Sb010965_Sorbi1    V G H G L D H D L E R L G L E Y P A F M I R D T A K Y P P L V K T S K L S N S L K Y L T Q A Y L G Y D I H T G I Q D P Y
 
AT2G48100.1     E D C V S A M R L Y K R M R - D Q E H V C - - - S G K A E - - - - - - - - - G N G L N S R K Q S D L E K M N A E E L Y Q
Sb007537_Sorbi1    E D C V A A M R L Y R R M R G Q Q Q H P R - - - G G G G D A D A P A A A T A D Q A F P A W R Q R E L E R M T P E E L L R
Sb010965_Sorbi1    E D C V A A M R L Y I R M R - S Q A H P R D Y N S G S G E - - - - - - - - A Q N N Y P A W R Q R E L E R M S P E E L L A
 
AT2G48100.1     K S T S E Y R C W C L D R L S N P
Sb007537_Sorbi1    L S T P D Y R C W C L D A - - - -
Sb010965_Sorbi1    L S A S D Y Y C W C L D Y - - - -
 
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