fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G48100.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm038206 SQQGCQLCLALFDSPG in 82/366 AT3G27970.1 1st_not 0.517385257 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G48100.1     MDSQLNPSKRRKISVRHRCVACYKMFNRREHLVEHMKISYHSLHQPRCGVCLKHCKSFES
gm038206_Glyma1 MDAEADPPQNP--ITRHKCLACYKQYKKKEHLIEHMKTSYHSVHQPRCGVCQKHCKSFES
                **:: :*.:.    .**:*:**** ::::***:**** ****:******** ********

AT2G48100.1     VREHLNVPDHLSKGNCKAIFTKRGCTLCLQIFEEAFALAEHKNKCHLSPPRPLGTST---
gm038206_Glyma1 LREHLTGP--LPRGICSKIFSQQGCQLCLALFDSPGSLIGHRETCRLSAPTCPGTSALPY
                :****. *  *.:* *. **:::** *** :*:.. :*  *::.*:**.*   ***:   

AT2G48100.1     -------QRNPSSSLAGSRL-KAMALDCEMVGGGADGTIDQCASVCLVDDDENVIFSTHV
gm038206_Glyma1 IDSQFDCQDSSDENHAGEGPGGAVAIDCEMVGGGSDGSLELCARVCLVDEDERLIFHTYV
                       * ..... **.    *:*:********:**::: ** *****:**.:** *:*

AT2G48100.1     QPLLPVTDYRHEITGLTKEDLKDGMPLEHVRERVFSFLCGGQNDGAGRL------LLVGH
gm038206_Glyma1 QPEIPVTNYRYDITGLTEEHLKNAIPLKKVREKLLQILQNGESIGKVRLDGGKARLLVGH
                ** :***:**::*****:*.**:.:**::***:::.:* .*:. *  **      *****

AT2G48100.1     DLRHDMSCLKLEYPSHLLRDTAKYVPLMKTNLVSQSLKYLTKSYLGYKIQCGKHEVYEDC
gm038206_Glyma1 DLAHDLDCLKMNYPDHMLRDTAKYRPLMKTNLVSHSLKYLTRTYLGYDIQSGTHDPYEDC
                ** **:.***::**.*:******* *********:******::****.**.*.*: ****

AT2G48100.1     VSAMRLYKRMRDQEHVCSGKAEGNGL-----------NSRKQSDLEKMNAEELYQKSTSE
gm038206_Glyma1 ISVMRLYKRIRSQLH----PEEDHGTMTLSNNIVGMPDSWISRELDNLTPDELYAMSRSD
                :*.******:*.* *      *.:*            :*  . :*:::..:***  * *:

AT2G48100.1     YRCWCLD---RLSNP
gm038206_Glyma1 YKCWCLDLIPRLSA-
                *:*****   ***
BoxShade v3.31 C (beta, 970507) Output
AT2G48100.1     M D S Q L N P S K R R K I S V R H R C V A C Y K M F N R R E H L V E H M K I S Y H S L H Q P R C G V C L K H C K S F E S
gm038206_Glyma1    M D A E A D P P Q N P - - I T R H K C L A C Y K Q Y K K K E H L I E H M K T S Y H S V H Q P R C G V C Q K H C K S F E S
 
AT2G48100.1     V R E H L N V P D H L S K G N C K A I F T K R G C T L C L Q I F E E A F A L A E H K N K C H L S P P R P L G T S T - - -
gm038206_Glyma1    L R E H L T G P - - L P R G I C S K I F S Q Q G C Q L C L A L F D S P G S L I G H R E T C R L S A P T C P G T S A L P Y
 
AT2G48100.1     - - - - - - - Q R N P S S S L A G S R L - K A M A L D C E M V G G G A D G T I D Q C A S V C L V D D D E N V I F S T H V
gm038206_Glyma1    I D S Q F D C Q D S S D E N H A G E G P G G A V A I D C E M V G G G S D G S L E L C A R V C L V D E D E R L I F H T Y V
 
AT2G48100.1     Q P L L P V T D Y R H E I T G L T K E D L K D G M P L E H V R E R V F S F L C G G Q N D G A G R L - - - - - - L L V G H
gm038206_Glyma1    Q P E I P V T N Y R Y D I T G L T E E H L K N A I P L K K V R E K L L Q I L Q N G E S I G K V R L D G G K A R L L V G H
 
AT2G48100.1     D L R H D M S C L K L E Y P S H L L R D T A K Y V P L M K T N L V S Q S L K Y L T K S Y L G Y K I Q C G K H E V Y E D C
gm038206_Glyma1    D L A H D L D C L K M N Y P D H M L R D T A K Y R P L M K T N L V S H S L K Y L T R T Y L G Y D I Q S G T H D P Y E D C
 
AT2G48100.1     V S A M R L Y K R M R D Q E H V C S G K A E G N G L - - - - - - - - - - - N S R K Q S D L E K M N A E E L Y Q K S T S E
gm038206_Glyma1    I S V M R L Y K R I R S Q L H - - - - P E E D H G T M T L S N N I V G M P D S W I S R E L D N L T P D E L Y A M S R S D
 
AT2G48100.1     Y R C W C L D - - - R L S N P
gm038206_Glyma1    Y K C W C L D L I P R L S A -
 
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