fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G48100.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm040920 SQQGCQLCLALFDSPG in 82/366 AT3G27970.1 not_not 0.517385257 III
Gm051356 not found in 346aa AT3G27970.1 not_not 0.438108484 III
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT2G48100.1     MDSQLNPSKRRKISVRHRCVACYKMFNRREHLVEHMKISYHSLHQPRCGVCLKHCKSFES
gm040920_Glyma1 MDAEADPPQNP--ITRHKCLACYKQYKKKEHLIEHMKTSYHSVHQPRCGVCQKHCKSFES
gm051356_Glyma1 MDCRIESAETH----RNKCAACFRQFNKLEHLVEHMRISYHSVHEPTCGICRKHCRSFES
                **.. :..:      *::* **:: ::: ***:***: ****:*:* **:* ***:****

AT2G48100.1     VREHLNVPDHLSKGNCKAIFTKRGCTLCLQIFEEAFALAEHKNKCHLSPPRPLGTS----
gm040920_Glyma1 LREHLTGP--LPRGICSKIFSQQGCQLCLALFDSPGSLIDHRKICRISAPTCPGTSALPY
gm051356_Glyma1 LREHLIGP--LPKQECRDIFSYRGCKFCLKVFESPNSRRIHQEKCQLS-----GTNA--G
                :****  *  *.:  *  **: :** :** :*:.. :   *:: *::*     **.    

AT2G48100.1     ----------TQRNPSSSLAGSR-LKAMALDCEMVGGGADGTIDQCASVCLVDDDENVIF
gm040920_Glyma1 IDSQFDCQDFSDENHAGEGPGG----AVAMDCEMVGGGSDGSLELCARVCLVDEDERLIF
gm051356_Glyma1 IIGRF--SNLGLRDNLAIGGGARGPQVVALACKMVGGGSDGSLDLCARVCLIDEHENIIF
                            .:  .   *.    .:*: *:*****:**::: ** ***:*:.*.:**

AT2G48100.1     STHVQPLLPVTDYRHEITGLTKEDLKDGMPLEHVRERVFSFLCGGQNDGAGRL------L
gm040920_Glyma1 HTYVQPEIPVTNYRYDITGLTEEHLRNAMPLKEVREKLLQILHNGESIGKVRLDGGKARL
gm051356_Glyma1 HSYVKPPIPVANYRYETTGITPEYLRDAMPMRHVQRRIHDFLCNGEPMWTIRARGGRARI
                 ::*:* :**::**:: **:* * *::.**:..*:.:: .:* .*:     *       :

AT2G48100.1     LVGHDLRHDMSCLKLEYPSHLLRDTAKYVPLMKTNLVSQSLKYLTKSYLGYKIQCGKHEV
gm040920_Glyma1 LVGHDLAHDLDCLKMNYPDHMLRDTAKYRPLMKTNLVSHSLKYLTRTYLGYDIQSGTHDP
gm051356_Glyma1 LVGHGLDHDLESLQIEYRAEKIRDTAKYPPLMKTSKLSNSLK--------YDIQTGIQDP
                ****.* **:..*:::*  . :****** *****. :*:***        *.** * :: 

AT2G48100.1     YEDCVSAMRLYKRMRDQEHV------CSGKAEGNGL-----------NSRKQSDLEKMNA
gm040920_Glyma1 YEDCISVMRLYKRIRSQLH----------PEEDHGTMTLSNNIVGMPDSWISRELDNLTP
gm051356_Glyma1 YEDCIATMRLYMRMRSQAHRVQEYPLASDPQNRNNF-----------ASWRQSEIERMSP
                ****::.**** *:*.* *            : :.             *  . :::.:..

AT2G48100.1     EELYQKSTSEYRCWCLD---RLSNP
gm040920_Glyma1 DELYAMSRSDYKCWCLDLIPRLSA-
gm051356_Glyma1 EQMLEISRSDYYCWCLD---SLY--
                :::   * *:* *****    *
BoxShade v3.31 C (beta, 970507) Output
AT2G48100.1     M D S Q L N P S K R R K I S V R H R C V A C Y K M F N R R E H L V E H M K I S Y H S L H Q P R C G V C L K H C K S F E S
gm040920_Glyma1    M D A E A D P P Q N P - - I T R H K C L A C Y K Q Y K K K E H L I E H M K T S Y H S V H Q P R C G V C Q K H C K S F E S
gm051356_Glyma1    M D C R I E S A E T H - - - - R N K C A A C F R Q F N K L E H L V E H M R I S Y H S V H E P T C G I C R K H C R S F E S
 
AT2G48100.1     V R E H L N V P D H L S K G N C K A I F T K R G C T L C L Q I F E E A F A L A E H K N K C H L S P P R P L G T S - - - -
gm040920_Glyma1    L R E H L T G P - - L P R G I C S K I F S Q Q G C Q L C L A L F D S P G S L I D H R K I C R I S A P T C P G T S A L P Y
gm051356_Glyma1    L R E H L I G P - - L P K Q E C R D I F S Y R G C K F C L K V F E S P N S R R I H Q E K C Q L S - - - - - G T N A - - G
 
AT2G48100.1     - - - - - - - - - - T Q R N P S S S L A G S R - L K A M A L D C E M V G G G A D G T I D Q C A S V C L V D D D E N V I F
gm040920_Glyma1    I D S Q F D C Q D F S D E N H A G E G P G G - - - - A V A M D C E M V G G G S D G S L E L C A R V C L V D E D E R L I F
gm051356_Glyma1    I I G R F - - S N L G L R D N L A I G G G A R G P Q V V A L A C K M V G G G S D G S L D L C A R V C L I D E H E N I I F
 
AT2G48100.1     S T H V Q P L L P V T D Y R H E I T G L T K E D L K D G M P L E H V R E R V F S F L C G G Q N D G A G R L - - - - - - L
gm040920_Glyma1    H T Y V Q P E I P V T N Y R Y D I T G L T E E H L R N A M P L K E V R E K L L Q I L H N G E S I G K V R L D G G K A R L
gm051356_Glyma1    H S Y V K P P I P V A N Y R Y E T T G I T P E Y L R D A M P M R H V Q R R I H D F L C N G E P M W T I R A R G G R A R I
 
AT2G48100.1     L V G H D L R H D M S C L K L E Y P S H L L R D T A K Y V P L M K T N L V S Q S L K Y L T K S Y L G Y K I Q C G K H E V
gm040920_Glyma1    L V G H D L A H D L D C L K M N Y P D H M L R D T A K Y R P L M K T N L V S H S L K Y L T R T Y L G Y D I Q S G T H D P
gm051356_Glyma1    L V G H G L D H D L E S L Q I E Y R A E K I R D T A K Y P P L M K T S K L S N S L K - - - - - - - - Y D I Q T G I Q D P
 
AT2G48100.1     Y E D C V S A M R L Y K R M R D Q E H V - - - - - - C S G K A E G N G L - - - - - - - - - - - N S R K Q S D L E K M N A
gm040920_Glyma1    Y E D C I S V M R L Y K R I R S Q L H - - - - - - - - - - P E E D H G T M T L S N N I V G M P D S W I S R E L D N L T P
gm051356_Glyma1    Y E D C I A T M R L Y M R M R S Q A H R V Q E Y P L A S D P Q N R N N F - - - - - - - - - - - A S W R Q S E I E R M S P
 
AT2G48100.1     E E L Y Q K S T S E Y R C W C L D - - - R L S N P
gm040920_Glyma1    D E L Y A M S R S D Y K C W C L D L I P R L S A -
gm051356_Glyma1    E Q M L E I S R S D Y Y C W C L D - - - S L Y - -
 
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