fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G01140.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt004718 not found in 401aa AT3G01140.1 1st_1st 0.524926686 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G01140.1     MPIHVRDREKGRLQNLNRDIFCCVSPSIYQSDAKRAAFVIILIMIISPCCDKAGLKKGPW
pt004718_POPTR_ ---------MGR----------------------------------SPCCDKVGLKKGPW
                          **                                  ******.*******

AT3G01140.1     TPEEDQKLLAYIEEHGHGSWRSLPEKAGLQRCGKSCRLRWTNYLRPDIKRGKFTVQEEQT
pt004718_POPTR_ TPEEDQKLLAYIEEHGHGSWRALPAKAGLQRCGKSCRLRWTNYLRPDIKRGKFSLQEEQT
                *********************:** ****************************::*****

AT3G01140.1     IIQLHALLGNRWSAIATHLPKRTDNEIKNYWNTHLKKRLIKMGIDPVTHKHKNETLSSST
pt004718_POPTR_ IIQLHALLGNRWSAIATHLPKRTDNEIKNYWNTHLKKRLAKMGIDPVTHKSKNDALLSID
                *************************************** ********** **::* *  

AT3G01140.1     GQSKNAATLSHMAQWESARLEAEARLARESKL--LHLQHYQNN--------------NNL
pt004718_POPTR_ GQSKNAANLSHMAQWESARLEAEARLVRESKLRSQSIQHQLSSTTPGYFPGSGSSPGSTS
                *******.******************.*****    :**  ..              .. 

AT3G01140.1     NKSAAPQQHCFTQKT-STNWTKPNQGNG-------DQQLESPTSTVTFSENLLMPLGIPT
pt004718_POPTR_ STLAQPPRSLDALKAWNDGWSKSSEGNGGGLNMGIGDVLESPTSTLTFSEN-----APPV
                .. * * :   : *: . .*:*..:***       .: *******:*****     . *.

AT3G01140.1     DSSRNRNNNNNESSAMIELAVSSSTSSDVSLVKEH-EHDWIR------------------
pt004718_POPTR_ MNSGAVGEN---SISMIEF-VGTSGSTETGIIKEEGEHDWKSLSNSSHLPDNSVSLTSTL
                 .*   .:*   * :***: *.:* *::..::**. ****                    

AT3G01140.1     ----------------QINCGSGGIG-----EGFTSLLIGDSVGRGLP-TGKN-EATAGV
pt004718_POPTR_ HDMTISMEAPWNPDSLRANCDNVHVGKNVMEEGFTHLLLSDSAERSLSDDGKDSDHSGGS
                                : **..  :*     **** **:.**. *.*.  **: : :.* 

AT3G01140.1     GNESEYNYYEDNKNYWNSILNLVDSSPSDSATMF
pt004718_POPTR_ GSGSGSNYYEDNKNYWNSILNLVNSSPSNSP-MF
                *. *  *****************:****:*. **
BoxShade v3.31 C (beta, 970507) Output
AT3G01140.1     M P I H V R D R E K G R L Q N L N R D I F C C V S P S I Y Q S D A K R A A F V I I L I M I I S P C C D K A G L K K G P W
pt004718_POPTR_    - - - - - - - - - M G R - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - S P C C D K V G L K K G P W
 
AT3G01140.1     T P E E D Q K L L A Y I E E H G H G S W R S L P E K A G L Q R C G K S C R L R W T N Y L R P D I K R G K F T V Q E E Q T
pt004718_POPTR_    T P E E D Q K L L A Y I E E H G H G S W R A L P A K A G L Q R C G K S C R L R W T N Y L R P D I K R G K F S L Q E E Q T
 
AT3G01140.1     I I Q L H A L L G N R W S A I A T H L P K R T D N E I K N Y W N T H L K K R L I K M G I D P V T H K H K N E T L S S S T
pt004718_POPTR_    I I Q L H A L L G N R W S A I A T H L P K R T D N E I K N Y W N T H L K K R L A K M G I D P V T H K S K N D A L L S I D
 
AT3G01140.1     G Q S K N A A T L S H M A Q W E S A R L E A E A R L A R E S K L - - L H L Q H Y Q N N - - - - - - - - - - - - - - N N L
pt004718_POPTR_    G Q S K N A A N L S H M A Q W E S A R L E A E A R L V R E S K L R S Q S I Q H Q L S S T T P G Y F P G S G S S P G S T S
 
AT3G01140.1     N K S A A P Q Q H C F T Q K T - S T N W T K P N Q G N G - - - - - - - D Q Q L E S P T S T V T F S E N L L M P L G I P T
pt004718_POPTR_    S T L A Q P P R S L D A L K A W N D G W S K S S E G N G G G L N M G I G D V L E S P T S T L T F S E N - - - - - A P P V
 
AT3G01140.1     D S S R N R N N N N N E S S A M I E L A V S S S T S S D V S L V K E H - E H D W I R - - - - - - - - - - - - - - - - - -
pt004718_POPTR_    M N S G A V G E N - - - S I S M I E F - V G T S G S T E T G I I K E E G E H D W K S L S N S S H L P D N S V S L T S T L
 
AT3G01140.1     - - - - - - - - - - - - - - - - Q I N C G S G G I G - - - - - E G F T S L L I G D S V G R G L P - T G K N - E A T A G V
pt004718_POPTR_    H D M T I S M E A P W N P D S L R A N C D N V H V G K N V M E E G F T H L L L S D S A E R S L S D D G K D S D H S G G S
 
AT3G01140.1     G N E S E Y N Y Y E D N K N Y W N S I L N L V D S S P S D S A T M F
pt004718_POPTR_    G S G S G S N Y Y E D N K N Y W N S I L N L V N S S P S N S P - M F
 
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