fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G01140.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm035059 LLLLHQLQLQLSIIIA in 182/382 AT3G01140.1 not_1st 0.482404692 II
Gm025799 RLLSFSLSLSLFIVSP in 14/367 AT3G01140.1 not_1st 0.470674486 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G01140.1     MPIHVRDREKGRLQNLNRDIFCCVSPSIYQSDAKRAAFVIILIMIISPCCDKAGLKKGPW
gm035059_Glyma1 -------------------------------------------MGRSPCCDKVGLKKGPW
gm025799_Glyma0 MPLTF-------LQ------YRLLSFSLSLS-----------LFIVSPCCDKVGLKKGPW
                                                           :  ******.*******

AT3G01140.1     TPEEDQKLLAYIEEHGHGSWRSLPEKAGLQRCGKSCRLRWTNYLRPDIKRGKFTVQEEQT
gm035059_Glyma1 TPEEDQKLLAYIEEHGHGSWRALPAKAGLQRCGKSCRLRWTNYLRPDIKRGKFSLQEEQT
gm025799_Glyma0 TPEEDQKLLAYIEEHGHGSWRALPAKAGLQRCGKSCRLRWTNYLRPDIKRGKFSMQEEQT
                *********************:** ****************************::*****

AT3G01140.1     IIQLHALLGNRWSAIATHLPKRTDNEIKNYWNTHLKKRLIKMGIDPVTHKHKNETLSSST
gm035059_Glyma1 IIQLHALLGNRWSAIATHLPKRTDNEIKNYWNTHLKKRLTKMGIDPVTHKPKNDALLSSD
gm025799_Glyma0 IIQLHALLGNRWSSIATHLPKRTDNEIKNYWNTHLKKRLDKMGIDPVTHKPKNDALLSTE
                *************:************************* ********** **::* *: 

AT3G01140.1     GQSKNAATLSHMAQWESARLEAEARLARESKLLHLQHYQ----NNNNLNKSAAP--QQHC
gm035059_Glyma1 GQSKTAANLSHMAQWESARLEAEARLVRESKILVLLHLHLLLLHQLQL--------QLSI
gm025799_Glyma0 GPSKIAANISHMAQWESARLEAEARLARESKLRSSSHSSSSSLHHTLIGTSASSSSSLSL
                * ** **.:*****************.****:    *      ::  :        .   

AT3G01140.1     FTQKTSTNWTKPNQGNGD--------QQLESPTSTVTFSENLLMPL--GIPTDSSRNRNN
gm035059_Glyma1 IIAWNSGGWLKSNEGSGAIASNVGVSGDLESPTSTLSFSEN-APPIMNGI-----RGENN
gm025799_Glyma0 DHAWKNGG------STITITVNATRVSDLESPTSTLS--------------------ENN
                    .. .      ..           :*******::                    .**

AT3G01140.1     NNNESSAMIEL--AVSSSTSSDVSLVKEH-EHDW--------------IRQINC------
gm035059_Glyma1 NNNKNDSAMPMIEFVRISGNSS-SLVKEEGEQEWKGTYDSSITTFSSSLHEFTMNMEGTW
gm025799_Glyma0 -------------FV---GSSERRTVKEEGDQD---------------LHELTMTMATTW
                              *    .*.   ***. :::               ::::.       

AT3G01140.1     ------GSGG------IGEG-FTSLLIGDSVGRGL---PTGKNEAT----------AGVG
gm035059_Glyma1 ASESLRTSGSHDD-DIVEEG-FTNLLLKTNSEDP-NLSSEGGGQSN-------NDDGGDG
gm025799_Glyma0 GSS---TSSAHEHAHVAEEGCFTNLLLNTNSGGHLSLSPEDGGESNYCHNNAGSSDAGSG
                       *..        ** **.**:  .        . . .::.          .* *

AT3G01140.1     NESEYNYYEDNKNYWNSILNLVD-SSPSDSATMF
gm035059_Glyma1 SNND--FYEDNNNYWNSILNLVN-SSPSHPP-MF
gm025799_Glyma0 NNGD--LYQENKNYWNNILNLMNYSSPSDSP-MF
                .:.:   *::*:****.****:: ****... **
BoxShade v3.31 C (beta, 970507) Output
AT3G01140.1     M P I H V R D R E K G R L Q N L N R D I F C C V S P S I Y Q S D A K R A A F V I I L I M I I S P C C D K A G L K K G P W
gm035059_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M G R S P C C D K V G L K K G P W
gm025799_Glyma0    M P L T F - - - - - - - L Q - - - - - - Y R L L S F S L S L S - - - - - - - - - - - L F I V S P C C D K V G L K K G P W
 
AT3G01140.1     T P E E D Q K L L A Y I E E H G H G S W R S L P E K A G L Q R C G K S C R L R W T N Y L R P D I K R G K F T V Q E E Q T
gm035059_Glyma1    T P E E D Q K L L A Y I E E H G H G S W R A L P A K A G L Q R C G K S C R L R W T N Y L R P D I K R G K F S L Q E E Q T
gm025799_Glyma0    T P E E D Q K L L A Y I E E H G H G S W R A L P A K A G L Q R C G K S C R L R W T N Y L R P D I K R G K F S M Q E E Q T
 
AT3G01140.1     I I Q L H A L L G N R W S A I A T H L P K R T D N E I K N Y W N T H L K K R L I K M G I D P V T H K H K N E T L S S S T
gm035059_Glyma1    I I Q L H A L L G N R W S A I A T H L P K R T D N E I K N Y W N T H L K K R L T K M G I D P V T H K P K N D A L L S S D
gm025799_Glyma0    I I Q L H A L L G N R W S S I A T H L P K R T D N E I K N Y W N T H L K K R L D K M G I D P V T H K P K N D A L L S T E
 
AT3G01140.1     G Q S K N A A T L S H M A Q W E S A R L E A E A R L A R E S K L L H L Q H Y Q - - - - N N N N L N K S A A P - - Q Q H C
gm035059_Glyma1    G Q S K T A A N L S H M A Q W E S A R L E A E A R L V R E S K I L V L L H L H L L L L H Q L Q L - - - - - - - - Q L S I
gm025799_Glyma0    G P S K I A A N I S H M A Q W E S A R L E A E A R L A R E S K L R S S S H S S S S S L H H T L I G T S A S S S S S L S L
 
AT3G01140.1     F T Q K T S T N W T K P N Q G N G D - - - - - - - - Q Q L E S P T S T V T F S E N L L M P L - - G I P T D S S R N R N N
gm035059_Glyma1    I I A W N S G G W L K S N E G S G A I A S N V G V S G D L E S P T S T L S F S E N - A P P I M N G I - - - - - R G E N N
gm025799_Glyma0    D H A W K N G G - - - - - - S T I T I T V N A T R V S D L E S P T S T L S - - - - - - - - - - - - - - - - - - - - E N N
 
AT3G01140.1     N N N E S S A M I E L - - A V S S S T S S D V S L V K E H - E H D W - - - - - - - - - - - - - - I R Q I N C - - - - - -
gm035059_Glyma1    N N N K N D S A M P M I E F V R I S G N S S - S L V K E E G E Q E W K G T Y D S S I T T F S S S L H E F T M N M E G T W
gm025799_Glyma0    - - - - - - - - - - - - - F V - - - G S S E R R T V K E E G D Q D - - - - - - - - - - - - - - - L H E L T M T M A T T W
 
AT3G01140.1     - - - - - - G S G G - - - - - - I G E G - F T S L L I G D S V G R G L - - - P T G K N E A T - - - - - - - - - - A G V G
gm035059_Glyma1    A S E S L R T S G S H D D - D I V E E G - F T N L L L K T N S E D P - N L S S E G G G Q S N - - - - - - - N D D G G D G
gm025799_Glyma0    G S S - - - T S S A H E H A H V A E E G C F T N L L L N T N S G G H L S L S P E D G G E S N Y C H N N A G S S D A G S G
 
AT3G01140.1     N E S E Y N Y Y E D N K N Y W N S I L N L V D - S S P S D S A T M F
gm035059_Glyma1    S N N D - - F Y E D N N N Y W N S I L N L V N - S S P S H P P - M F
gm025799_Glyma0    N N G D - - L Y Q E N K N Y W N N I L N L M N Y S S P S D S P - M F
 
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