fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G01140.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm051030 not found in 407aa AT3G01140.1 1st_1st 0.492668621 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G01140.1     MPIHVRDREKGRLQNLNRDIFCCVSPSIYQSDAKRAAFVIILIMIISPCCDKAGLKKGPW
gm051030_Glyma1 -MYSLAQVEK-------------VDNTIY----PREFSCFHLQMGRSPCCDKVGLKKGPW
                    : : **             *. :**     *    : * *  ******.*******

AT3G01140.1     TPEEDQKLLAYIEEHGHGSWRSLPEKAGLQRCGKSCRLRWTNYLRPDIKRGKFTVQEEQT
gm051030_Glyma1 TPEEDQKLLAYIEEHGHGSWRALPAKAGLQRCGKSCRLRWTNYLRPDIKRGKFSLQEEQT
                *********************:** ****************************::*****

AT3G01140.1     IIQLHALLGNRWSAIATHLPKRTDNEIKNYWNTHLKKRLIKMGIDPVTHKHKNETLSSST
gm051030_Glyma1 IIQLHALLGNRWSAIATHLPKRTDNEIKNYWNTHIKKRLTKMGIDPVTHKPKNDALLSSD
                **********************************:**** ********** **::* ** 

AT3G01140.1     GQSKNAATLSHMAQWESARLEAEARLARESKLL--HLQHY--------------------
gm051030_Glyma1 GQSKTAANLSHMAQWESARLEAEARLVRESKIRSHSLQHQLGSSSSTFASSSSASTSASA
                ****.**.******************.****:    ***                     

AT3G01140.1     QNNNNLNKSAAP-------QQHCFTQKTSTNWTKPNQGNG--------DQQLESPTSTVT
gm051030_Glyma1 LNNNNKPEAQRPPPPPSRSSLDVLKAWNSGGWLESNEGNGGIVSNVGVSGDLESPTSTLS
                 ****  ::  *       . . :.  .* .* :.*:***        . :*******::

AT3G01140.1     FSEN---LLMPLGIPTDSSRNRNNNNNESS-AMIELAVSSSTSSDVSLVKEH-EHDWIRQ
gm051030_Glyma1 FSENAPPIMNGIG-------GENNNNNDSAMPMIEFVGNSGNSS--SLVKEEAEQEWKST
                ****   ::  :*       ..*****:*: .***:. .*..**  *****. *::*   

AT3G01140.1     INCG--SGGIGEGFTSLLI---GDSVGRGLPTGKNEATAGVGNESEYNYYEDNKNYWNSI
gm051030_Glyma1 YDSSITTTFSSEGFTNLLLKTNSDDPSLSSEDGGESKNGDGGGGTNSDFYEDNNNYWNSI
                 :..  :   .****.**:   .*. . .   * :. ... *. :: ::****:******

AT3G01140.1     LNLVDSSPSDSATMF
gm051030_Glyma1 LNLVNSSPSHSP-MF
                ****:****.*. **
BoxShade v3.31 C (beta, 970507) Output
AT3G01140.1     M P I H V R D R E K G R L Q N L N R D I F C C V S P S I Y Q S D A K R A A F V I I L I M I I S P C C D K A G L K K G P W
gm051030_Glyma1    - M Y S L A Q V E K - - - - - - - - - - - - - V D N T I Y - - - - P R E F S C F H L Q M G R S P C C D K V G L K K G P W
 
AT3G01140.1     T P E E D Q K L L A Y I E E H G H G S W R S L P E K A G L Q R C G K S C R L R W T N Y L R P D I K R G K F T V Q E E Q T
gm051030_Glyma1    T P E E D Q K L L A Y I E E H G H G S W R A L P A K A G L Q R C G K S C R L R W T N Y L R P D I K R G K F S L Q E E Q T
 
AT3G01140.1     I I Q L H A L L G N R W S A I A T H L P K R T D N E I K N Y W N T H L K K R L I K M G I D P V T H K H K N E T L S S S T
gm051030_Glyma1    I I Q L H A L L G N R W S A I A T H L P K R T D N E I K N Y W N T H I K K R L T K M G I D P V T H K P K N D A L L S S D
 
AT3G01140.1     G Q S K N A A T L S H M A Q W E S A R L E A E A R L A R E S K L L - - H L Q H Y - - - - - - - - - - - - - - - - - - - -
gm051030_Glyma1    G Q S K T A A N L S H M A Q W E S A R L E A E A R L V R E S K I R S H S L Q H Q L G S S S S T F A S S S S A S T S A S A
 
AT3G01140.1     Q N N N N L N K S A A P - - - - - - - Q Q H C F T Q K T S T N W T K P N Q G N G - - - - - - - - D Q Q L E S P T S T V T
gm051030_Glyma1    L N N N N K P E A Q R P P P P P S R S S L D V L K A W N S G G W L E S N E G N G G I V S N V G V S G D L E S P T S T L S
 
AT3G01140.1     F S E N - - - L L M P L G I P T D S S R N R N N N N N E S S - A M I E L A V S S S T S S D V S L V K E H - E H D W I R Q
gm051030_Glyma1    F S E N A P P I M N G I G - - - - - - - G E N N N N N D S A M P M I E F V G N S G N S S - - S L V K E E A E Q E W K S T
 
AT3G01140.1     I N C G - - S G G I G E G F T S L L I - - - G D S V G R G L P T G K N E A T A G V G N E S E Y N Y Y E D N K N Y W N S I
gm051030_Glyma1    Y D S S I T T T F S S E G F T N L L L K T N S D D P S L S S E D G G E S K N G D G G G G T N S D F Y E D N N N Y W N S I
 
AT3G01140.1     L N L V D S S P S D S A T M F
gm051030_Glyma1    L N L V N S S P S H S P - M F
 
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