fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G01330.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt023953 not found in 385aa AT3G48160.2 not_not 0.455319148 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G01330.1     --MSSAIVVSQDAESLGLQIYSRKEKSLGVLVSNFLRLYNRDDVDLIGLDDAAGQLGVER
pt023953_POPTR_ MALSYSDIIDPSSRH---HTYSRKQKSLGLLCTNFLTLYDRDDIDVIGLDDAASKLGVER
                  :* : ::. .:.    : ****:****:* :*** **:***:*:*******.:*****

AT3G01330.1     RRIYDVVNILESIGIVARRGKNQYSWKGFGEIPRSLDELKEEGMRERLGY--SSSNNSDK
pt023953_POPTR_ RRIYDIVNVLESVGVLARKAKNKYLWKGFAAVPKALQELKEEGLRDNVNTIDKQSNNSVK
                *****:**:***:*::**:.**:* ****. :*::*:******:*:.:.   ..**** *

AT3G01330.1     VSNGCEREEPLTLTPDD----------QENS------SSSKMDQKKEKSLWLLAQNFVKM
pt023953_POPTR_ VADDDEDED------DDSDSNPNTGSQNENSGIIKSTAASRFDHRREKSLGLLTQNFVKL
                *::. * *:      **          :***      ::*::*:::**** **:*****:

AT3G01330.1     FLCSDDDLITLDSAAKALLSDSPDSVHMRTKVRRLYDIANVFASMNLIEKTHIPVTRKPA
pt023953_POPTR_ FVCFNANLISLDESAKLLLGDGHKSSIMRTKVRRLYDIANVLSSLKLIEKTHTADTRKPA
                *:* : :**:**.:** **.*. .*  **************::*::****** . *****

AT3G01330.1     YRWLGSKSIAERGLSLFNSGEP-------KRVFGTEITNLRAKRNKTYCS---------S
pt023953_POPTR_ FRWLGLRGKSENG-----SGDPLAPFESRKRTFGADVTNICSKRNKTDSSVDGDKSKNLK
                :**** :. :*.*     **:*       **.**:::**: :***** .*         .

AT3G01330.1     IRKQIGYKKHDEE--------NTEQESKPAASKYVFGPFSPIGASKTNNDKVGKGRLLEI
pt023953_POPTR_ MQKQI----KDENIVTVVQRGNFDQDSQQNSGSFQFGPFAPVSIARVGNSEEKVTQIYDW
                ::***    :**:        * :*:*:  :..: ****:*:. ::..*.:    :: : 

AT3G01330.1     EALASTYQPQYCNQEITGLLGHFTEAWKKWYAEVDRNK-----
pt023953_POPTR_ EGLSSTFRPQYHNQALRDLFFHYTEAWKSWYTEVAGKKPLHIS
                *.*:**::*** ** : .*: *:*****.**:**  :*
BoxShade v3.31 C (beta, 970507) Output
AT3G01330.1     - - M S S A I V V S Q D A E S L G L Q I Y S R K E K S L G V L V S N F L R L Y N R D D V D L I G L D D A A G Q L G V E R
pt023953_POPTR_    M A L S Y S D I I D P S S R H - - - H T Y S R K Q K S L G L L C T N F L T L Y D R D D I D V I G L D D A A S K L G V E R
 
AT3G01330.1     R R I Y D V V N I L E S I G I V A R R G K N Q Y S W K G F G E I P R S L D E L K E E G M R E R L G Y - - S S S N N S D K
pt023953_POPTR_    R R I Y D I V N V L E S V G V L A R K A K N K Y L W K G F A A V P K A L Q E L K E E G L R D N V N T I D K Q S N N S V K
 
AT3G01330.1     V S N G C E R E E P L T L T P D D - - - - - - - - - - Q E N S - - - - - - S S S K M D Q K K E K S L W L L A Q N F V K M
pt023953_POPTR_    V A D D D E D E D - - - - - - D D S D S N P N T G S Q N E N S G I I K S T A A S R F D H R R E K S L G L L T Q N F V K L
 
AT3G01330.1     F L C S D D D L I T L D S A A K A L L S D S P D S V H M R T K V R R L Y D I A N V F A S M N L I E K T H I P V T R K P A
pt023953_POPTR_    F V C F N A N L I S L D E S A K L L L G D G H K S S I M R T K V R R L Y D I A N V L S S L K L I E K T H T A D T R K P A
 
AT3G01330.1     Y R W L G S K S I A E R G L S L F N S G E P - - - - - - - K R V F G T E I T N L R A K R N K T Y C S - - - - - - - - - S
pt023953_POPTR_    F R W L G L R G K S E N G - - - - - S G D P L A P F E S R K R T F G A D V T N I C S K R N K T D S S V D G D K S K N L K
 
AT3G01330.1     I R K Q I G Y K K H D E E - - - - - - - - N T E Q E S K P A A S K Y V F G P F S P I G A S K T N N D K V G K G R L L E I
pt023953_POPTR_    M Q K Q I - - - - K D E N I V T V V Q R G N F D Q D S Q Q N S G S F Q F G P F A P V S I A R V G N S E E K V T Q I Y D W
 
AT3G01330.1     E A L A S T Y Q P Q Y C N Q E I T G L L G H F T E A W K K W Y A E V D R N K - - - - -
pt023953_POPTR_    E G L S S T F R P Q Y H N Q A L R D L F F H Y T E A W K S W Y T E V A G K K P L H I S
 
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