fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G01330.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt026275 not found in 384aa AT3G48160.2 1st_not 0.456737588 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G01330.1     --MSSAIVVSQDAESLGLQIYSRKEKSLGVLVSNFLRLYNRDDVDLIGLDDAAGQLGVER
pt026275_POPTR_ MALSYTDIIDPPSRH---HAYSRKQKSLGLLCTNFLTLYNRDDIDVIGLDDAASKLGVER
                  :* : ::.  :.    : ****:****:* :*** ******:*:*******.:*****

AT3G01330.1     RRIYDVVNILESIGIVARRGKNQYSWKGFGEIPRSLDELKEEGMRERLGY--SSSNNSDK
pt026275_POPTR_ RRIYDIVNVLESVGVLARKAKNKYSWKGFASVPKALQDLKEEGLRDNVNTIDRQSNNSAK
                *****:**:***:*::**:.**:******..:*::*::*****:*:.:.    .**** *

AT3G01330.1     VSNGCEREEPLTLTPDD----------QENSS------SSKMDQKKEKSLWLLAQNFVKM
pt026275_POPTR_ VANDDEDED------DDSDSNPNTGSQNENSSIIKSTAVSRSDHRREKSLGLLTQNFVKL
                *:*. * *:      **          :****       *: *:::**** **:*****:

AT3G01330.1     FLCSDDDLITLDSAAKALLSDSPDSVHMRTKVRRLYDIANVFASMNLIEKTHIPVTRKPA
pt026275_POPTR_ FVCSNANLISLDESAKLLLGDGHNLSIMRTKVRRLYDIANVLSSLKLIEKTHTADTRKPA
                *:**: :**:**.:** **.*. :   **************::*::****** . *****

AT3G01330.1     YRWLGSKSIAERGLSLFNSGEP-------KRVFGTEITNLRAKRNKTYCS----------
pt026275_POPTR_ FRWLGFRGKSENG-----SGDPLAPFESRKRTFGADITNTCFKRNKMDSSVDGDKSQNLK
                :**** :. :*.*     **:*       **.**::***   ****  .*          

AT3G01330.1     --SIRKQIGYKKHDEENTEQESKPAASKYVFGPFSPIGASKTNNDKVGKGRLLEIEALAS
pt026275_POPTR_ MQQIKDENMVTVAERGNFGQDLQQKSGSFQFGPFAPVSVAKAGNPEDNVTRIYDWEGLSS
                  .*:.:   .  :. *  *: :  :..: ****:*:..:*:.* : .  *: : *.*:*

AT3G01330.1     TYQPQYCNQEITGLLGHFTEAWKKWYAEVDRNK-----
pt026275_POPTR_ TFRPQYHNQALRDLFSHYTEAWKLWYTEVAGKKPLHIS
                *::*** ** : .*:.*:***** **:**  :*
BoxShade v3.31 C (beta, 970507) Output
AT3G01330.1     - - M S S A I V V S Q D A E S L G L Q I Y S R K E K S L G V L V S N F L R L Y N R D D V D L I G L D D A A G Q L G V E R
pt026275_POPTR_    M A L S Y T D I I D P P S R H - - - H A Y S R K Q K S L G L L C T N F L T L Y N R D D I D V I G L D D A A S K L G V E R
 
AT3G01330.1     R R I Y D V V N I L E S I G I V A R R G K N Q Y S W K G F G E I P R S L D E L K E E G M R E R L G Y - - S S S N N S D K
pt026275_POPTR_    R R I Y D I V N V L E S V G V L A R K A K N K Y S W K G F A S V P K A L Q D L K E E G L R D N V N T I D R Q S N N S A K
 
AT3G01330.1     V S N G C E R E E P L T L T P D D - - - - - - - - - - Q E N S S - - - - - - S S K M D Q K K E K S L W L L A Q N F V K M
pt026275_POPTR_    V A N D D E D E D - - - - - - D D S D S N P N T G S Q N E N S S I I K S T A V S R S D H R R E K S L G L L T Q N F V K L
 
AT3G01330.1     F L C S D D D L I T L D S A A K A L L S D S P D S V H M R T K V R R L Y D I A N V F A S M N L I E K T H I P V T R K P A
pt026275_POPTR_    F V C S N A N L I S L D E S A K L L L G D G H N L S I M R T K V R R L Y D I A N V L S S L K L I E K T H T A D T R K P A
 
AT3G01330.1     Y R W L G S K S I A E R G L S L F N S G E P - - - - - - - K R V F G T E I T N L R A K R N K T Y C S - - - - - - - - - -
pt026275_POPTR_    F R W L G F R G K S E N G - - - - - S G D P L A P F E S R K R T F G A D I T N T C F K R N K M D S S V D G D K S Q N L K
 
AT3G01330.1     - - S I R K Q I G Y K K H D E E N T E Q E S K P A A S K Y V F G P F S P I G A S K T N N D K V G K G R L L E I E A L A S
pt026275_POPTR_    M Q Q I K D E N M V T V A E R G N F G Q D L Q Q K S G S F Q F G P F A P V S V A K A G N P E D N V T R I Y D W E G L S S
 
AT3G01330.1     T Y Q P Q Y C N Q E I T G L L G H F T E A W K K W Y A E V D R N K - - - - -
pt026275_POPTR_    T F R P Q Y H N Q A L R D L F S H Y T E A W K L W Y T E V A G K K P L H I S
 
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