fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G01330.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm046546 not found in 380aa AT3G48160.2 1st_not 0.434042553 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G01330.1     MSSAIVVSQDAESLGLQIYSRKEKSLGVLVSNFLRLYNRDDVDLIGLDDAAGQLGVERRR
gm046546_Glyma1 -----MASSDPISSRHYTYNRKQKSLGLLCTNFLSLYNRDTVHLIGLDDAATRLGVERRR
                     :.*.*. *     *.**:****:* :*** ***** *.******** :*******

AT3G01330.1     IYDVVNILESIGIVARRGKNQYSWKGFGEIPRSLDELKEEGMRERLGYSSSN------NS
gm046546_Glyma1 IYDIVNVLESIGVLSRKAKNQYTWRGFAAIPLTLQDLKEEGLKE-----NSNSLRGPGNH
                ***:**:*****:::*:.****:*:**. ** :*::*****::*     .**      * 

AT3G01330.1     DKVSNGCEREE-----PLTLTPDDQENSSSS-----KMDQKKEKSLWLLAQNFVKMFLCS
gm046546_Glyma1 DKVSDDEDDEETQSNPAATGSQSDKLNPNSTLPKPLKNENRREKSLALLTQNFVKLFVCS
                ****:. : **     . * : .*: *..*:     * ::::**** **:*****:*:**

AT3G01330.1     DDDLITLDSAAKALLSDSPDSVHMRTKVRRLYDIANVFASMNLIEKTHIPVTRKPAYRWL
gm046546_Glyma1 NVELISLDEAAKLLLGDAHNTSVMRTKVRRLYDIANVLSSMNLIEKTHTMDTRKPAFRWL
                : :**:**.*** **.*: ::  **************::*********   *****:***

AT3G01330.1     GSKSIA-ERGLSLFNSGEP-KRVFGTEITNLRAKRNKT--YCSS----------IRKQIG
gm046546_Glyma1 GSEGKTWDETLHKSNLNDSRKRAFGSDITNISFERNKVELFTSGDLNPNPKKPRMENGSG
                **:. : :. *   * .:. **.**::***:  :***.  : *.          :.:  *

AT3G01330.1     YKKHDEENTEQESKPAASKYVFGPFSP-----IGASKTNNDKVGKGRLLEIEALASTYQP
gm046546_Glyma1 LGEADENNLKQGIKQASKSYEFGPFAPACVPKVGASQNNNMK----QVHDWGSLATAHSP
                  : **:* :*  * *:..* ****:*     :***:.** *    :: :  :**:::.*

AT3G01330.1     QYCNQEITGLLGHFTEAWKKWYAEVDRNK-----
gm046546_Glyma1 QYQNEALRELFSHYMEAWKLWYSEIARKRPLQIL
                ** *: :  *:.*: **** **:*: *::
BoxShade v3.31 C (beta, 970507) Output
AT3G01330.1     M S S A I V V S Q D A E S L G L Q I Y S R K E K S L G V L V S N F L R L Y N R D D V D L I G L D D A A G Q L G V E R R R
gm046546_Glyma1    - - - - - M A S S D P I S S R H Y T Y N R K Q K S L G L L C T N F L S L Y N R D T V H L I G L D D A A T R L G V E R R R
 
AT3G01330.1     I Y D V V N I L E S I G I V A R R G K N Q Y S W K G F G E I P R S L D E L K E E G M R E R L G Y S S S N - - - - - - N S
gm046546_Glyma1    I Y D I V N V L E S I G V L S R K A K N Q Y T W R G F A A I P L T L Q D L K E E G L K E - - - - - N S N S L R G P G N H
 
AT3G01330.1     D K V S N G C E R E E - - - - - P L T L T P D D Q E N S S S S - - - - - K M D Q K K E K S L W L L A Q N F V K M F L C S
gm046546_Glyma1    D K V S D D E D D E E T Q S N P A A T G S Q S D K L N P N S T L P K P L K N E N R R E K S L A L L T Q N F V K L F V C S
 
AT3G01330.1     D D D L I T L D S A A K A L L S D S P D S V H M R T K V R R L Y D I A N V F A S M N L I E K T H I P V T R K P A Y R W L
gm046546_Glyma1    N V E L I S L D E A A K L L L G D A H N T S V M R T K V R R L Y D I A N V L S S M N L I E K T H T M D T R K P A F R W L
 
AT3G01330.1     G S K S I A - E R G L S L F N S G E P - K R V F G T E I T N L R A K R N K T - - Y C S S - - - - - - - - - - I R K Q I G
gm046546_Glyma1    G S E G K T W D E T L H K S N L N D S R K R A F G S D I T N I S F E R N K V E L F T S G D L N P N P K K P R M E N G S G
 
AT3G01330.1     Y K K H D E E N T E Q E S K P A A S K Y V F G P F S P - - - - - I G A S K T N N D K V G K G R L L E I E A L A S T Y Q P
gm046546_Glyma1    L G E A D E N N L K Q G I K Q A S K S Y E F G P F A P A C V P K V G A S Q N N N M K - - - - Q V H D W G S L A T A H S P
 
AT3G01330.1     Q Y C N Q E I T G L L G H F T E A W K K W Y A E V D R N K - - - - -
gm046546_Glyma1    Q Y Q N E A L R E L F S H Y M E A W K L W Y S E I A R K R P L Q I L
 
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