fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G01530.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt031763 not found in 190aa AT3G27810.1 1st_not 0.566750629 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G01530.1     METTMKKKGRVKATITSQKEEEGTVRKGPWTMEEDFILFNYILNHGEGLWNSVAKASGLK
pt031763_POPTR_ MD---------KSPCNSQDVE---VRKGPWTLEEDLILTNYIANHGEGVWNSLAKAAGLK
                *:         *:. .**. *   *******:***:** *** *****:***:***:***

AT3G01530.1     RTGKSCRLRWLNYLRPDVRRGNITEEEQLLIIQLHAKLGNRWSKIAKHLPGRTDNEIKNF
pt031763_POPTR_ RTGKSCRLRWLNYLRPDLRRGNITPEEQLLIMELHAKLGNRWSKIAKHLPGRTDNEIKNY
                *****************:****** ******::**************************:

AT3G01530.1     WRTKIQRHMKVSSENMMNHQHHCSGNSQSS---GMTTQGSSGKAIDTAES----FSQAKT
pt031763_POPTR_ WRTRIKKHTKQT-------EPFAAGSSETNEHGSSTCQVSS--ATDQMETYCPPFYQGDV
                ***:*::* * :       : ..:*.*::.   . * * **  * *  *:    * *...

AT3G01530.1     TTFN--VVEQQSNENYWNVEDLWPVHLLNGDHHVI
pt031763_POPTR_ GAFSGGNIPQELNENYWSMEDLWSMQLLNGD----
                 :*.   : *: *****.:****.::*****
BoxShade v3.31 C (beta, 970507) Output
AT3G01530.1     M E T T M K K K G R V K A T I T S Q K E E E G T V R K G P W T M E E D F I L F N Y I L N H G E G L W N S V A K A S G L K
pt031763_POPTR_    M D - - - - - - - - - K S P C N S Q D V E - - - V R K G P W T L E E D L I L T N Y I A N H G E G V W N S L A K A A G L K
 
AT3G01530.1     R T G K S C R L R W L N Y L R P D V R R G N I T E E E Q L L I I Q L H A K L G N R W S K I A K H L P G R T D N E I K N F
pt031763_POPTR_    R T G K S C R L R W L N Y L R P D L R R G N I T P E E Q L L I M E L H A K L G N R W S K I A K H L P G R T D N E I K N Y
 
AT3G01530.1     W R T K I Q R H M K V S S E N M M N H Q H H C S G N S Q S S - - - G M T T Q G S S G K A I D T A E S - - - - F S Q A K T
pt031763_POPTR_    W R T R I K K H T K Q T - - - - - - - E P F A A G S S E T N E H G S S T C Q V S S - - A T D Q M E T Y C P P F Y Q G D V
 
AT3G01530.1     T T F N - - V V E Q Q S N E N Y W N V E D L W P V H L L N G D H H V I
pt031763_POPTR_    G A F S G G N I P Q E L N E N Y W S M E D L W S M Q L L N G D - - - -
 
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