fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G01530.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm011693 not found in 206aa AT3G27810.1 1st_not 0.569269521 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G01530.1     METTMKKKGRVKATITSQKEEEGTVRKGPWTMEEDFILFNYILNHGEGLWNSVAKASGLK
gm011693_Glyma0 ----MDKK---PCNSSSHDPE---VRKGPWTMEEDLILINYIANHGEGVWNSLAKASGLK
                    *.**    .. :*:. *   ***********:**:*** *****:***:*******

AT3G01530.1     RTGKSCRLRWLNYLRPDVRRGNITEEEQLLIIQLHAKLGNRWSKIAKHLPGRTDNEIKNF
gm011693_Glyma0 RTGKSCRLRWLNYLRPDVRRGNITPEEQLLIIELHAKWGNRWSKIAKHLPGRTDNEIKNF
                ************************ *******:**** **********************

AT3G01530.1     WRTKIQRHMKVSSENMMNHQHHCSGNSQSSGMTTQGSSGKAIDTA---ESFS----QAKT
gm011693_Glyma0 WRTRIQKHIKQAE---TSQQH---GNSENNDHQASTSTSKVSTMAHPNETFSPPSYQGTF
                ***:**:*:* :.    .:**   ***:...  :. *:.*.   *   *:**    *.. 

AT3G01530.1     TTFN-----VVEQQS-------NENYWNVEDLW-PVHLLNGDHHVI
gm011693_Glyma0 EPFQPQFPTITDQSSCCTTTNDNNNYWSIEDIWSSMQLLNGD----
                 .*:     :.:*.*       *:***.:**:* .::*****
BoxShade v3.31 C (beta, 970507) Output
AT3G01530.1     M E T T M K K K G R V K A T I T S Q K E E E G T V R K G P W T M E E D F I L F N Y I L N H G E G L W N S V A K A S G L K
gm011693_Glyma0    - - - - M D K K - - - P C N S S S H D P E - - - V R K G P W T M E E D L I L I N Y I A N H G E G V W N S L A K A S G L K
 
AT3G01530.1     R T G K S C R L R W L N Y L R P D V R R G N I T E E E Q L L I I Q L H A K L G N R W S K I A K H L P G R T D N E I K N F
gm011693_Glyma0    R T G K S C R L R W L N Y L R P D V R R G N I T P E E Q L L I I E L H A K W G N R W S K I A K H L P G R T D N E I K N F
 
AT3G01530.1     W R T K I Q R H M K V S S E N M M N H Q H H C S G N S Q S S G M T T Q G S S G K A I D T A - - - E S F S - - - - Q A K T
gm011693_Glyma0    W R T R I Q K H I K Q A E - - - T S Q Q H - - - G N S E N N D H Q A S T S T S K V S T M A H P N E T F S P P S Y Q G T F
 
AT3G01530.1     T T F N - - - - - V V E Q Q S - - - - - - - N E N Y W N V E D L W - P V H L L N G D H H V I
gm011693_Glyma0    E P F Q P Q F P T I T D Q S S C C T T T N D N N N Y W S I E D I W S S M Q L L N G D - - - -
 
0