fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G01600.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb010670 not found in 399aa AT3G01600.1 1st_1st 0.337874659 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G01600.1     MARAWIVDGRGIAAKVKNASLSSALQIQDCGAHIK--CPNCTYRIDNSNVLIPWPGLPKG
Sb010670_Sorbi1 MARSWLITGRGIAKKIRYAAPSANRQIRELIAEARRECPNCSYVIDNSDVAMQWPGLPAG
                ***:*:: ***** *:: *: *:  **::  *. :  ****:* ****:* : ***** *

AT3G01600.1     VKFEPTDEDIIEFLEAKCGIGGSEPHVLIEEFIRPVTEDVGINYTHPQNLPGANKDGVSV
Sb010670_Sorbi1 VKFDPSELELLQHLEQKVGLGGSRPHVLIDEFIPTIDNDEGICYSHPENLPGIKTDGSNA
                ***:*:: ::::.** * *:***.*****:*** .: :* ** *:**:**** :.** ..

AT3G01600.1     FFFHKTVQAYGTGQRKRRKITPT---LVNDEPVRWHKTGRTKPVMLSGVQRGCKKIMVLY
Sb010670_Sorbi1 HFFHRVSNAYGCGLRKRRRIINCNNHTVPDEHVRWHKTGRSKAICDNGVIKGWRKIMVLY
                .***:. :*** * ****:*       * ** ********:*.:  .** :* :******

AT3G01600.1     KSARKGTKPEKSNWVLHQYHLGTEGKEI-GDYVVSKITYQ----------QQKLGENPDE
Sb010670_Sorbi1 KASQRGGKPDRANWVMHQYHLGEEEDEKDGELVVSKVFCQLPNKSMEICETETAYEEPDA
                *::::* **:::***:****** * .*  *: ****:  *           :.  *:** 

AT3G01600.1     GESSSGVRGGPTTPKTNTPTP--------------PSLVDGVAGDEEAFDDLKMFDPFFE
Sb010670_Sorbi1 PASVI----GPKTPKTNAPQPRHPKNSPCETEQNIPILQDQLLLDSKGEPTMPII-----
                  *      **.*****:* *              * * * :  *.:.   : ::     

AT3G01600.1     ELDSIPEAALGKMWSKKARMDEEFVVNL-------SEDNLICDESMEASSLWENQVLP--
Sb010670_Sorbi1 ---SLEDDATNPVWCAIA--EEQQVVGEASRAQLNSDEPLLCHE--DPNSLNDKALLPLD
                   *: : * . :*.  *  :*: **.        *:: *:*.*  :..** :: :**  

AT3G01600.1     NPSLGTVG------DFDGFSISDLENADLGTPPDFLTVRSCLKKTLFTFGKFNGT-----
Sb010670_Sorbi1 YPILSQCRNEMLDWNLNGHGLPDLHNVDLGTPPDF-------QLADFQFGSQESLGSWLD
                 * *.         :::*..:.**.*.********       : : * **. :.      

AT3G01600.1     --
Sb010670_Sorbi1 RI
BoxShade v3.31 C (beta, 970507) Output
AT3G01600.1     M A R A W I V D G R G I A A K V K N A S L S S A L Q I Q D C G A H I K - - C P N C T Y R I D N S N V L I P W P G L P K G
Sb010670_Sorbi1    M A R S W L I T G R G I A K K I R Y A A P S A N R Q I R E L I A E A R R E C P N C S Y V I D N S D V A M Q W P G L P A G
 
AT3G01600.1     V K F E P T D E D I I E F L E A K C G I G G S E P H V L I E E F I R P V T E D V G I N Y T H P Q N L P G A N K D G V S V
Sb010670_Sorbi1    V K F D P S E L E L L Q H L E Q K V G L G G S R P H V L I D E F I P T I D N D E G I C Y S H P E N L P G I K T D G S N A
 
AT3G01600.1     F F F H K T V Q A Y G T G Q R K R R K I T P T - - - L V N D E P V R W H K T G R T K P V M L S G V Q R G C K K I M V L Y
Sb010670_Sorbi1    H F F H R V S N A Y G C G L R K R R R I I N C N N H T V P D E H V R W H K T G R S K A I C D N G V I K G W R K I M V L Y
 
AT3G01600.1     K S A R K G T K P E K S N W V L H Q Y H L G T E G K E I - G D Y V V S K I T Y Q - - - - - - - - - - Q Q K L G E N P D E
Sb010670_Sorbi1    K A S Q R G G K P D R A N W V M H Q Y H L G E E E D E K D G E L V V S K V F C Q L P N K S M E I C E T E T A Y E E P D A
 
AT3G01600.1     G E S S S G V R G G P T T P K T N T P T P - - - - - - - - - - - - - - P S L V D G V A G D E E A F D D L K M F D P F F E
Sb010670_Sorbi1    P A S V I - - - - G P K T P K T N A P Q P R H P K N S P C E T E Q N I P I L Q D Q L L L D S K G E P T M P I I - - - - -
 
AT3G01600.1     E L D S I P E A A L G K M W S K K A R M D E E F V V N L - - - - - - - S E D N L I C D E S M E A S S L W E N Q V L P - -
Sb010670_Sorbi1    - - - S L E D D A T N P V W C A I A - - E E Q Q V V G E A S R A Q L N S D E P L L C H E - - D P N S L N D K A L L P L D
 
AT3G01600.1     N P S L G T V G - - - - - - D F D G F S I S D L E N A D L G T P P D F L T V R S C L K K T L F T F G K F N G T - - - - -
Sb010670_Sorbi1    Y P I L S Q C R N E M L D W N L N G H G L P D L H N V D L G T P P D F - - - - - - - Q L A D F Q F G S Q E S L G S W L D
 
AT3G01600.1     - -
Sb010670_Sorbi1    R I
 
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