fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G02310.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt018990 not found in 245aa AT3G02310.1 not_1st 0.726915520 II
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G02310.1     MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVSLIVFSNRGKLYEFCST
pt018990_POPTR_ MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST
                *******************************************:**:*************

AT3G02310.1     SNMLKTLERYQKCSYGSIEVNNKPAKELENSYREYLKLKGRYENLQRQQRNLLGEDLGPL
pt018990_POPTR_ SNMLKTLERYQKCSYGAEEV-NKPAKELESSYREYLKVKARFEALQRTQRNLLGEDLGPL
                ****************: ** ********.*******:*.*:* *** ************

AT3G02310.1     NSKELEQLERQLDGSLKQVRCIKTQYMLDQLSDLQGKEHILLDANRALSMKLEDMIGVRH
pt018990_POPTR_ NTKELEQLERQLESSLNQVRSTKTQYMLDQLADLQNKEHLLLEANRGLTIKL-DEISAR-
                *:**********:.**:***. *********:***.***:**:***.*::** * *..* 

AT3G02310.1     HHIGGGWEGGDQQNIAYGHPQAHSQGLYQSLECDPTLQIGYSHPVCSEQMAVTVQGQSQQ
pt018990_POPTR_ NSLRPSWEGDDQQNMSYGHQHAQSQGLFQALECNPTLQIGYN-PVGSDQMTATTHA-TQQ
                : :  .***.****::*** :*:****:*:***:*******. ** *:**:.*.:. :**

AT3G02310.1     GNGYIPGWML
pt018990_POPTR_ VHGFIPGWML
                 :*:******
BoxShade v3.31 C (beta, 970507) Output
AT3G02310.1     M G R G R V E L K R I E N K I N R Q V T F A K R R N G L L K K A Y E L S V L C D A E V S L I V F S N R G K L Y E F C S T
pt018990_POPTR_    M G R G R V E L K R I E N K I N R Q V T F A K R R N G L L K K A Y E L S V L C D A E V A L I I F S N R G K L Y E F C S T
 
AT3G02310.1     S N M L K T L E R Y Q K C S Y G S I E V N N K P A K E L E N S Y R E Y L K L K G R Y E N L Q R Q Q R N L L G E D L G P L
pt018990_POPTR_    S N M L K T L E R Y Q K C S Y G A E E V - N K P A K E L E S S Y R E Y L K V K A R F E A L Q R T Q R N L L G E D L G P L
 
AT3G02310.1     N S K E L E Q L E R Q L D G S L K Q V R C I K T Q Y M L D Q L S D L Q G K E H I L L D A N R A L S M K L E D M I G V R H
pt018990_POPTR_    N T K E L E Q L E R Q L E S S L N Q V R S T K T Q Y M L D Q L A D L Q N K E H L L L E A N R G L T I K L - D E I S A R -
 
AT3G02310.1     H H I G G G W E G G D Q Q N I A Y G H P Q A H S Q G L Y Q S L E C D P T L Q I G Y S H P V C S E Q M A V T V Q G Q S Q Q
pt018990_POPTR_    N S L R P S W E G D D Q Q N M S Y G H Q H A Q S Q G L F Q A L E C N P T L Q I G Y N - P V G S D Q M T A T T H A - T Q Q
 
AT3G02310.1     G N G Y I P G W M L
pt018990_POPTR_    V H G F I P G W M L
 
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