fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G02310.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt041129 not found in 242aa AT5G15800.1 not_not 0.522593320 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G02310.1     MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVSLIVFSNRGKLYEFCST
pt041129_POPTR_ MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNSGKLFEFCSS
                *******************************************:**:*** ***:****:

AT3G02310.1     SNMLKTLERYQKCSYGSIEVNNKPAKELENSYREYLKLKGRYENLQRQQRNLLGEDLGPL
pt041129_POPTR_ SNMATTIEKYQRFSYGALEGGQSEKETQQNNYQEYLKLKTRVDVLQRSQRNLLGEDLGNL
                *** .*:*:**: ***::* .:.  :  :*.*:****** * : ***.********** *

AT3G02310.1     NSKELEQLERQLDGSLKQVRCIKTQYMLDQLSDLQGKEHILLDANRALSMKLEDMIGVRH
pt041129_POPTR_ GTMELDQLENQLDSSLKQIRSRKGQFVLDELSELQRKEELLLETNNALKRKLEETSAA--
                .: **:***.***.****:*. * *::**:**:** **.:**::*.**. ***:  ..  

AT3G02310.1     HHIGGGWEGGDQQNIAYGHPQAHSQGLYQSLECDPTLQIGYSHPVCSEQMAVTVQGQSQQ
pt041129_POPTR_ --IRLSWKVGEQR-VPYSFQPVQPYDPIEPLQYNSTFQFGYN-PAETDQ--ATVTSSSQN
                  *  .*: *:*: :.*..  .:. .  :.*: :.*:*:**. *. ::*  .** ..**:

AT3G02310.1     GNGYIPGWML
pt041129_POPTR_ VNGFIPGWML
                 **:******
BoxShade v3.31 C (beta, 970507) Output
AT3G02310.1     M G R G R V E L K R I E N K I N R Q V T F A K R R N G L L K K A Y E L S V L C D A E V S L I V F S N R G K L Y E F C S T
pt041129_POPTR_    M G R G R V E L K R I E N K I N R Q V T F A K R R N G L L K K A Y E L S V L C D A E V A L I I F S N S G K L F E F C S S
 
AT3G02310.1     S N M L K T L E R Y Q K C S Y G S I E V N N K P A K E L E N S Y R E Y L K L K G R Y E N L Q R Q Q R N L L G E D L G P L
pt041129_POPTR_    S N M A T T I E K Y Q R F S Y G A L E G G Q S E K E T Q Q N N Y Q E Y L K L K T R V D V L Q R S Q R N L L G E D L G N L
 
AT3G02310.1     N S K E L E Q L E R Q L D G S L K Q V R C I K T Q Y M L D Q L S D L Q G K E H I L L D A N R A L S M K L E D M I G V R H
pt041129_POPTR_    G T M E L D Q L E N Q L D S S L K Q I R S R K G Q F V L D E L S E L Q R K E E L L L E T N N A L K R K L E E T S A A - -
 
AT3G02310.1     H H I G G G W E G G D Q Q N I A Y G H P Q A H S Q G L Y Q S L E C D P T L Q I G Y S H P V C S E Q M A V T V Q G Q S Q Q
pt041129_POPTR_    - - I R L S W K V G E Q R - V P Y S F Q P V Q P Y D P I E P L Q Y N S T F Q F G Y N - P A E T D Q - - A T V T S S S Q N
 
AT3G02310.1     G N G Y I P G W M L
pt041129_POPTR_    V N G F I P G W M L
 
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