fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G02310.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb031117 not found in 328aa AT1G24260.1 1st_not 0.491159135 II
Sb022017 not found in 365aa AT3G02310.1 not_1st 0.459724950 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G02310.1     ---------------------------------------------------MGRGRVELK
Sb031117_Sorbi1 PIDPPPPPPQILALCLAFLLLLLWRERGSTVDLAAEAEGSAGAGGGRAATNMGRGRVELK
Sb022017_Sorbi1 -------------------------------------------------EDMGRGKVELK
                                                                   ****:****

AT3G02310.1     RIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVSLIVFSNRGKLYEFCSTSNMLKTLER
Sb031117_Sorbi1 RIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFSSTQSMPKTLEK
Sb022017_Sorbi1 RIENKISRQVTFAKRRNGLLKKAYELSLLCDAEVALIIFSGRGRLFEFSSSSCMYKTLER
                ******.********************:******:**:**.**:*:**.*:. * ****:

AT3G02310.1     YQKCSYGSIE--VNNKPAKELENSYREYLKLKGRYENLQRQQRNLLGEDLGPLNSKELEQ
Sb031117_Sorbi1 YQKCSFAGPETAVQNRENEQLKSSRNEYLKLKARVDNLQRTQRNLLGEDLESLGIKELEH
Sb022017_Sorbi1 YRSSNYSSQE--VKVPLDSEI--NYQDYLKLRTRVEFLQTTQRNILGEDLGPLSMKELEQ
                *:...:.. *  *:    .::  . .:****: * : **  ***:***** .*. ****:

AT3G02310.1     LERQLDGSLKQVRCIKTQYMLDQLSDLQGKEHILLDANRALSMKLEDMIGVRHHHIGGGW
Sb031117_Sorbi1 LEKQLDSSLKHIRSTRTQHMVDQLTELQKREQMFCEANKCLRRRLEESNQVIWQH---AW
Sb022017_Sorbi1 LENQIETSLKQIRSRENQMLLDQLFDLKSKEQELQDLNKDLRKKLQETSPENVLHVS-SW
                **.*:: ***::*. ..* ::*** :*: :*: : : *: *  :*::       *   .*

AT3G02310.1     EGGDQQNIA----------YGHP-----QAHSQGLYQSLEC--DPTLQIGYSHPVCSEQM
Sb031117_Sorbi1 EQQGER---------------HPEVQPQQLHGNNFFHPLDAAGEPTLQIGYPSEALTSSC
Sb022017_Sorbi1 EEGGHSGASGNVLDPYQGLLQHPES------------------DPSLQIGYHQQAYMDQL
                *  ..                **                    :*:*****   .  .. 

AT3G02310.1     AVTVQ-GQSQQGNGYIPGWML
Sb031117_Sorbi1 MTT-----------FLPPWLP
Sb022017_Sorbi1 NNEDMAGPNEHGR---SGWI-
                                . *:
BoxShade v3.31 C (beta, 970507) Output
AT3G02310.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M G R G R V E L K
Sb031117_Sorbi1    P I D P P P P P P Q I L A L C L A F L L L L L W R E R G S T V D L A A E A E G S A G A G G G R A A T N M G R G R V E L K
Sb022017_Sorbi1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - E D M G R G K V E L K
 
AT3G02310.1     R I E N K I N R Q V T F A K R R N G L L K K A Y E L S V L C D A E V S L I V F S N R G K L Y E F C S T S N M L K T L E R
Sb031117_Sorbi1    R I E N K I N R Q V T F A K R R N G L L K K A Y E L S V L C D A E V A L I I F S N R G K L Y E F S S T Q S M P K T L E K
Sb022017_Sorbi1    R I E N K I S R Q V T F A K R R N G L L K K A Y E L S L L C D A E V A L I I F S G R G R L F E F S S S S C M Y K T L E R
 
AT3G02310.1     Y Q K C S Y G S I E - - V N N K P A K E L E N S Y R E Y L K L K G R Y E N L Q R Q Q R N L L G E D L G P L N S K E L E Q
Sb031117_Sorbi1    Y Q K C S F A G P E T A V Q N R E N E Q L K S S R N E Y L K L K A R V D N L Q R T Q R N L L G E D L E S L G I K E L E H
Sb022017_Sorbi1    Y R S S N Y S S Q E - - V K V P L D S E I - - N Y Q D Y L K L R T R V E F L Q T T Q R N I L G E D L G P L S M K E L E Q
 
AT3G02310.1     L E R Q L D G S L K Q V R C I K T Q Y M L D Q L S D L Q G K E H I L L D A N R A L S M K L E D M I G V R H H H I G G G W
Sb031117_Sorbi1    L E K Q L D S S L K H I R S T R T Q H M V D Q L T E L Q K R E Q M F C E A N K C L R R R L E E S N Q V I W Q H - - - A W
Sb022017_Sorbi1    L E N Q I E T S L K Q I R S R E N Q M L L D Q L F D L K S K E Q E L Q D L N K D L R K K L Q E T S P E N V L H V S - S W
 
AT3G02310.1     E G G D Q Q N I A - - - - - - - - - - Y G H P - - - - - Q A H S Q G L Y Q S L E C - - D P T L Q I G Y S H P V C S E Q M
Sb031117_Sorbi1    E Q Q G E R - - - - - - - - - - - - - - - H P E V Q P Q Q L H G N N F F H P L D A A G E P T L Q I G Y P S E A L T S S C
Sb022017_Sorbi1    E E G G H S G A S G N V L D P Y Q G L L Q H P E S - - - - - - - - - - - - - - - - - - D P S L Q I G Y H Q Q A Y M D Q L
 
AT3G02310.1     A V T V Q - G Q S Q Q G N G Y I P G W M L
Sb031117_Sorbi1    M T T - - - - - - - - - - - F L P P W L P
Sb022017_Sorbi1    N N E D M A G P N E H G R - - - S G W I -
 
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