fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G02310.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb023523 WGVCGSLSLSLCVCVC in 32/401 AT1G24260.1 not_not 0.487229862 III
Sb027891 not found in 285aa AT2G45650.1 not_not 0.445972495 III
Sb003019 EANQERLHLALDPSLH in 202/225 AT1G24260.1 not_not 0.434184675 III
Sb020212 not found in 410aa AT5G15800.2 not_not 0.430255402 III
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G02310.1     -------------MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVSLIV
Sb003019_Sorbi1 -------------MGRGKVELKRIENKISRQVTFAKRRNGLLKKAYELSVLCDAEVALII
Sb023523_Sorbi1 -------LEGLGAMGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALII
Sb020212_Sorbi1 -------------MGRGKVVLQRIENKISRQVTFAKRRNGLLKKAYELSILCDAEVALVL
Sb027891_Sorbi1 RENSELSEEKEIVMGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALII
                             ****:* *:******.*****:**************:******:*::

AT3G02310.1     FSNRGKLYEFCSTSNMLKTLERYQKCSYGSIEVNNK-PAKEL-ENSYREYLKLKGRYENL
Sb003019_Sorbi1 FSSRGRLFEFSTSSCMYKTLERYRSCNFAS-EASAP-LEAEL--NNYQEYLKLKTKVEFL
Sb023523_Sorbi1 FSNRGKLYEFCSGQSITKTLERYEKSNYGGPDTAVQNKENELVQSSRNEYLKLKARVDNL
Sb020212_Sorbi1 FSHAGRLYQFSSSSNLLKTLERYQRYIYASADAAVP-SSDEM-QNNYQEYVNLKARVEVL
Sb027891_Sorbi1 FSSRGKLYEFGSAG-ITKTLERYQHCCYNAQDSNG--ALSET-QSWYQEMSKLRAKFEAL
                **  *:*::* :   : ******.   : . :        *   .  .*  :*: : : *

AT3G02310.1     QRQQRNLLGEDLGPLNSKELEQLERQLDGSLKQVRCIKTQYMLDQLSDLQGKEHILLDAN
Sb003019_Sorbi1 QTTQRNLLGEDLGPLNVKELEQLENQIEISLKHIRSSKNQQMLDQLFDLKRKEQQLQDAN
Sb023523_Sorbi1 QRTQRNLLGEDLGSLGIKELEQLEKQLDSSLRHIRSTRTQHMLDQLTDLQRREQMLCEAN
Sb020212_Sorbi1 QHSQRNLLGEDLAPLSPSELDQLESQVDKTLKQIRSRKTQVLLDELCDLKRKEQMLQDAN
Sb027891_Sorbi1 QRTQRHLLGEDLGPLSVKELQQLEKQLECALSQARQRKTQLMMEQVEELRRKERHLGEMN
                *  **:******..*. .**:*** *:: :* : *  :.* ::::: :*: :*: * : *

AT3G02310.1     RALSMKLEDM---------------IGVRHH-------------HIG-GGWEG-GDQQNI
Sb003019_Sorbi1 KDLRRKIQETSEE----------NVLRLSCQ-------------DIGCSGSSGHGDEANQ
Sb023523_Sorbi1 KCLRRKLEETSNQVHGQVWEHGANLLGYERHSPPQQAP-----SHVG-----------NG
Sb020212_Sorbi1 RVLKRKVSDS--------------------------------------------------
Sb027891_Sorbi1 RQLKHKLEAE-----------GSSNYRTLQHAAAWPAPGGTIVEHDG-----------AT
                : *  *:.                                                    

AT3G02310.1     AYGHPQAHSQGLYQSLECDPTLQIGYSH----PVCSEQMAVTV-QGQSQQGNGYIPGWML
Sb003019_Sorbi1 ERLH-----------LALDPSLHIGY------------------QAYMDHMNND------
Sb023523_Sorbi1 LFFHPLE--------AAAEPTLQIGFA-----P---------------EHMNNFMPTWLP
Sb020212_Sorbi1 ------------------------------------------------------------
Sb027891_Sorbi1 YHVHPPAHSVA----IDCEPTLQIGYPHHQFLP--SDQAANNIPRNAPGGENNFMLGWVL
BoxShade v3.31 C (beta, 970507) Output
AT3G02310.1     - - - - - - - - - - - - - M G R G R V E L K R I E N K I N R Q V T F A K R R N G L L K K A Y E L S V L C D A E V S L I V
Sb003019_Sorbi1    - - - - - - - - - - - - - M G R G K V E L K R I E N K I S R Q V T F A K R R N G L L K K A Y E L S V L C D A E V A L I I
Sb023523_Sorbi1    - - - - - - - L E G L G A M G R G R V E L K R I E N K I N R Q V T F A K R R N G L L K K A Y E L S V L C D A E V A L I I
Sb020212_Sorbi1    - - - - - - - - - - - - - M G R G K V V L Q R I E N K I S R Q V T F A K R R N G L L K K A Y E L S I L C D A E V A L V L
Sb027891_Sorbi1    R E N S E L S E E K E I V M G R G R V E L K R I E N K I N R Q V T F S K R R N G L L K K A Y E L S V L C D A E V A L I I
 
AT3G02310.1     F S N R G K L Y E F C S T S N M L K T L E R Y Q K C S Y G S I E V N N K - P A K E L - E N S Y R E Y L K L K G R Y E N L
Sb003019_Sorbi1    F S S R G R L F E F S T S S C M Y K T L E R Y R S C N F A S - E A S A P - L E A E L - - N N Y Q E Y L K L K T K V E F L
Sb023523_Sorbi1    F S N R G K L Y E F C S G Q S I T K T L E R Y E K S N Y G G P D T A V Q N K E N E L V Q S S R N E Y L K L K A R V D N L
Sb020212_Sorbi1    F S H A G R L Y Q F S S S S N L L K T L E R Y Q R Y I Y A S A D A A V P - S S D E M - Q N N Y Q E Y V N L K A R V E V L
Sb027891_Sorbi1    F S S R G K L Y E F G S A G - I T K T L E R Y Q H C C Y N A Q D S N G - - A L S E T - Q S W Y Q E M S K L R A K F E A L
 
AT3G02310.1     Q R Q Q R N L L G E D L G P L N S K E L E Q L E R Q L D G S L K Q V R C I K T Q Y M L D Q L S D L Q G K E H I L L D A N
Sb003019_Sorbi1    Q T T Q R N L L G E D L G P L N V K E L E Q L E N Q I E I S L K H I R S S K N Q Q M L D Q L F D L K R K E Q Q L Q D A N
Sb023523_Sorbi1    Q R T Q R N L L G E D L G S L G I K E L E Q L E K Q L D S S L R H I R S T R T Q H M L D Q L T D L Q R R E Q M L C E A N
Sb020212_Sorbi1    Q H S Q R N L L G E D L A P L S P S E L D Q L E S Q V D K T L K Q I R S R K T Q V L L D E L C D L K R K E Q M L Q D A N
Sb027891_Sorbi1    Q R T Q R H L L G E D L G P L S V K E L Q Q L E K Q L E C A L S Q A R Q R K T Q L M M E Q V E E L R R K E R H L G E M N
 
AT3G02310.1     R A L S M K L E D M - - - - - - - - - - - - - - - I G V R H H - - - - - - - - - - - - - H I G - G G W E G - G D Q Q N I
Sb003019_Sorbi1    K D L R R K I Q E T S E E - - - - - - - - - - N V L R L S C Q - - - - - - - - - - - - - D I G C S G S S G H G D E A N Q
Sb023523_Sorbi1    K C L R R K L E E T S N Q V H G Q V W E H G A N L L G Y E R H S P P Q Q A P - - - - - S H V G - - - - - - - - - - - N G
Sb020212_Sorbi1    R V L K R K V S D S - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb027891_Sorbi1    R Q L K H K L E A E - - - - - - - - - - - G S S N Y R T L Q H A A A W P A P G G T I V E H D G - - - - - - - - - - - A T
 
AT3G02310.1     A Y G H P Q A H S Q G L Y Q S L E C D P T L Q I G Y S H - - - - P V C S E Q M A V T V - Q G Q S Q Q G N G Y I P G W M L
Sb003019_Sorbi1    E R L H - - - - - - - - - - - L A L D P S L H I G Y - - - - - - - - - - - - - - - - - - Q A Y M D H M N N D - - - - - -
Sb023523_Sorbi1    L F F H P L E - - - - - - - - A A A E P T L Q I G F A - - - - - P - - - - - - - - - - - - - - - E H M N N F M P T W L P
Sb020212_Sorbi1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb027891_Sorbi1    Y H V H P P A H S V A - - - - I D C E P T L Q I G Y P H H Q F L P - - S D Q A A N N I P R N A P G G E N N F M L G W V L
 
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