fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G02310.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm035154 not found in 248aa AT5G15800.1 1st_not 0.689587426 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G02310.1     MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVSLIVFSNRGKLYEFCST
gm035154_Glyma1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSTRGKLYEFCST
                *******************************************:**:**.**********

AT3G02310.1     SNMLKTLERYQKCSYGSIEVNNKPAKELENSYREYLKLKGRYENLQRQQRNLLGEDLGPL
gm035154_Glyma1 NSMLKTLERYQKCSYGAVEV-SKPGKELESSYREYLKLKARFESLQRTQRNLLGEDLGPL
                ..**************::** .**.****.*********.*:*.*** ************

AT3G02310.1     NSKELEQLERQLDGSLKQVRCIKTQYMLDQLSDLQGKEHILLDANRALSMKLEDMIGVRH
gm035154_Glyma1 NTKDLEQLERQLDSSLKQVRSTKTQFMLDQLADLQNKEHMLVEANRSLTMKLEE-INSRN
                *:*:*********.******. ***:*****:***.***:*::***:*:****: *. *:

AT3G02310.1     HHIGGGWEGGDQQNIAYGHPQAHSQGLYQSLECDPTLQIG----YSHPVCSEQMAVTVQG
gm035154_Glyma1 QY-RQTWEAG-EQSMSYGTQNAHSQGFFQPLECNPTLQIGSDYRYNPEASEQQLAATT--
                ::    **.* :*.::**  :*****::*.***:******    *.  ...:*:*.*.  

AT3G02310.1     QSQQGNGYIPGWML
gm035154_Glyma1 QAQQVNGFIPGWML
                *:** **:******
BoxShade v3.31 C (beta, 970507) Output
AT3G02310.1     M G R G R V E L K R I E N K I N R Q V T F A K R R N G L L K K A Y E L S V L C D A E V S L I V F S N R G K L Y E F C S T
gm035154_Glyma1    M G R G R V E L K R I E N K I N R Q V T F A K R R N G L L K K A Y E L S V L C D A E V A L I I F S T R G K L Y E F C S T
 
AT3G02310.1     S N M L K T L E R Y Q K C S Y G S I E V N N K P A K E L E N S Y R E Y L K L K G R Y E N L Q R Q Q R N L L G E D L G P L
gm035154_Glyma1    N S M L K T L E R Y Q K C S Y G A V E V - S K P G K E L E S S Y R E Y L K L K A R F E S L Q R T Q R N L L G E D L G P L
 
AT3G02310.1     N S K E L E Q L E R Q L D G S L K Q V R C I K T Q Y M L D Q L S D L Q G K E H I L L D A N R A L S M K L E D M I G V R H
gm035154_Glyma1    N T K D L E Q L E R Q L D S S L K Q V R S T K T Q F M L D Q L A D L Q N K E H M L V E A N R S L T M K L E E - I N S R N
 
AT3G02310.1     H H I G G G W E G G D Q Q N I A Y G H P Q A H S Q G L Y Q S L E C D P T L Q I G - - - - Y S H P V C S E Q M A V T V Q G
gm035154_Glyma1    Q Y - R Q T W E A G - E Q S M S Y G T Q N A H S Q G F F Q P L E C N P T L Q I G S D Y R Y N P E A S E Q Q L A A T T - -
 
AT3G02310.1     Q S Q Q G N G Y I P G W M L
gm035154_Glyma1    Q A Q Q V N G F I P G W M L
 
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