fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G02550.1 GSGEIKLDLTLRLEPV at 220/263 in AT3G02550.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb021354 not found in 455aa AT1G67100.1 1st_not 0.434 II
Sb032897 EEEEVGLELTLGFEPV in 292/429 AT3G02550.1 not_1st 0.4 II
ASSLIGLRLQLPAAGE in 325/429
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Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G02550.1     --------MRMSCNGCRVL----RKGCSEDCSIRPCLAWIKSP-----------------
Sb032897_Sorbi1 --------MRMSCNGCRVL----RKGCSDACTIRPCLQWIETP-----------------
Sb021354_Sorbi1 YRTQRNKEILGRCSAALFFTEKERKNLGRSLFFVVCLLTRHGPKIVVRHVARCGELAISG
                        :   *... .:    **. .    :  **   . *                 

AT3G02550.1     ---EAQAN----------ATVFLAKFYGRAGLMNLINAGPNH-LRPGIFRSLLHEACGRI
Sb032897_Sorbi1 ---DAQAN----------ATVFLAKFYGRAGLLNLLAAAPDDAARPAVFRSLLYEACGRI
Sb021354_Sorbi1 RQLQAQADEARCGAQAQPAVVVVARRFGL-----LLLPLPDERLQPE-----------RE
                   :***:          *.*.:*: :*      *: . *:.  :*            * 

AT3G02550.1     VNP------IYGSVGLLWSGNWQLCQDAVEAVMKGEPVKEIATDAATIGQGP--------
Sb032897_Sorbi1 VNP------VYGSVGLLWSRQWHKCVDAVDAVLRGHPVVQVDAGSAAAAAPPLLGGGGAG
Sb021354_Sorbi1 LQPNLLFLVVLISV-LLGAADWWRM------------ALQLGLGLAHVGVGV---GVGVG
                ::*      :  ** ** : :*               . ::  . *  .           

AT3G02550.1     ----------------------------------PLKIYD------IRHISKDDNSAAAA
Sb032897_Sorbi1 ARS-----------------------AA-----APAAAYD------IRHVVKDPDAAAAA
Sb021354_Sorbi1 VRRRLHVGVLLRPLLLRLQVVVVVVVAAGGLLVVPVVVLNDRLRLLLRLLSRPSRQRFVV
                                                  *    :      :* : :      ..

AT3G02550.1     TGS-TD-LKLAK-----TRRAKRVSTVAIQAES---EGK------------SDEASHDSS
Sb032897_Sorbi1 -----DLLRVARG---GRKRFKRAGSSS-DASS---EGKVKPLKPKAEAGCNERASLSPS
Sb021354_Sorbi1 VASRRAPLLVAAGLGGGARRRRGALASTRDAEEVCRGGGVRIL--------GDMADVEPA
                       * :*       :* : . : : :*..    *             .: *. ..:

AT3G02550.1     ---------------------LSHQSEIVAAH-------------------------EGE
Sb032897_Sorbi1 PPLKRQEQEAEEMEPVPMVVELEHGEESAGSHD-HHHLQL----------------QQGS
Sb021354_Sorbi1 A--------------------AEHQRRCGGGVDLHDGLALEHGLDGGLARVPLAGPEQAD
                                      .*  .  ..                          :..

AT3G02550.1     SK-----ESESNVSEVLA------------------FSPPAVKGSG-------------E
Sb032897_Sorbi1 SEEDTDVEAASHVSQAEA-------------------EPPVSSHSQSQVLVAADQEEEEE
Sb021354_Sorbi1 GAVDRVDDAAARLVEEGAEDGRAEVVLGGWRRGQQVEQPRAAVELG---------EEDGG
                .      :: :.: :  *                   .* .                   

AT3G02550.1     IKLDLTLRLEPVSRAYHVVPVKKRRIGVFGTCQKESTC----------------KTELML
Sb032897_Sorbi1 VGLELTLGFEPVVRQ-----------------QPRSSCCDRSGLSAASSL---IGLRLQL
Sb021354_Sorbi1 VGLRLR-GLDPLQAG----PDRARVAAALA--QDAAAVAAHPHVSRSSSLLAIVGVWSMM
                : * *   ::*:                    *  ::                      :

AT3G02550.1     ----
Sb032897_Sorbi1 PAA-
Sb021354_Sorbi1 SFGR
BoxShade v3.31 C (beta, 970507) Output
AT3G02550.1     - - - - - - - - M R M S C N G C R V L - - - - R K G C S E D C S I R P C L A W I K S P - - - - - - - - - - - - - - - - -
Sb032897_Sorbi1    - - - - - - - - M R M S C N G C R V L - - - - R K G C S D A C T I R P C L Q W I E T P - - - - - - - - - - - - - - - - -
Sb021354_Sorbi1    Y R T Q R N K E I L G R C S A A L F F T E K E R K N L G R S L F F V V C L L T R H G P K I V V R H V A R C G E L A I S G
 
AT3G02550.1     - - - E A Q A N - - - - - - - - - - A T V F L A K F Y G R A G L M N L I N A G P N H - L R P G I F R S L L H E A C G R I
Sb032897_Sorbi1    - - - D A Q A N - - - - - - - - - - A T V F L A K F Y G R A G L L N L L A A A P D D A A R P A V F R S L L Y E A C G R I
Sb021354_Sorbi1    R Q L Q A Q A D E A R C G A Q A Q P A V V V V A R R F G L - - - - - L L L P L P D E R L Q P E - - - - - - - - - - - R E
 
AT3G02550.1     V N P - - - - - - I Y G S V G L L W S G N W Q L C Q D A V E A V M K G E P V K E I A T D A A T I G Q G P - - - - - - - -
Sb032897_Sorbi1    V N P - - - - - - V Y G S V G L L W S R Q W H K C V D A V D A V L R G H P V V Q V D A G S A A A A A P P L L G G G G A G
Sb021354_Sorbi1    L Q P N L L F L V V L I S V - L L G A A D W W R M - - - - - - - - - - - - A L Q L G L G L A H V G V G V - - - G V G V G
 
AT3G02550.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - P L K I Y D - - - - - - I R H I S K D D N S A A A A
Sb032897_Sorbi1    A R S - - - - - - - - - - - - - - - - - - - - - - - A A - - - - - A P A A A Y D - - - - - - I R H V V K D P D A A A A A
Sb021354_Sorbi1    V R R R L H V G V L L R P L L L R L Q V V V V V V V A A G G L L V V P V V V L N D R L R L L L R L L S R P S R Q R F V V
 
AT3G02550.1     T G S - T D - L K L A K - - - - - T R R A K R V S T V A I Q A E S - - - E G K - - - - - - - - - - - - S D E A S H D S S
Sb032897_Sorbi1    - - - - - D L L R V A R G - - - G R K R F K R A G S S S - D A S S - - - E G K V K P L K P K A E A G C N E R A S L S P S
Sb021354_Sorbi1    V A S R R A P L L V A A G L G G G A R R R R G A L A S T R D A E E V C R G G G V R I L - - - - - - - - G D M A D V E P A
 
AT3G02550.1     - - - - - - - - - - - - - - - - - - - - - L S H Q S E I V A A H - - - - - - - - - - - - - - - - - - - - - - - - - E G E
Sb032897_Sorbi1    P P L K R Q E Q E A E E M E P V P M V V E L E H G E E S A G S H D - H H H L Q L - - - - - - - - - - - - - - - - Q Q G S
Sb021354_Sorbi1    A - - - - - - - - - - - - - - - - - - - - A E H Q R R C G G G V D L H D G L A L E H G L D G G L A R V P L A G P E Q A D
 
AT3G02550.1     S K - - - - - E S E S N V S E V L A - - - - - - - - - - - - - - - - - - F S P P A V K G S G - - - - - - - - - - - - - E
Sb032897_Sorbi1    S E E D T D V E A A S H V S Q A E A - - - - - - - - - - - - - - - - - - - E P P V S S H S Q S Q V L V A A D Q E E E E E
Sb021354_Sorbi1    G A V D R V D D A A A R L V E E G A E D G R A E V V L G G W R R G Q Q V E Q P R A A V E L G - - - - - - - - - E E D G G
 
AT3G02550.1     I K L D L T L R L E P V S R A Y H V V P V K K R R I G V F G T C Q K E S T C - - - - - - - - - - - - - - - - K T E L M L
Sb032897_Sorbi1    V G L E L T L G F E P V V R Q - - - - - - - - - - - - - - - - - Q P R S S C C D R S G L S A A S S L - - - I G L R L Q L
Sb021354_Sorbi1    V G L R L R - G L D P L Q A G - - - - P D R A R V A A A L A - - Q D A A A V A A H P H V S R S S S L L A I V G V W S M M
 
AT3G02550.1     - - - -
Sb032897_Sorbi1    P A A -
Sb021354_Sorbi1    S F G R
 
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