fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G02790.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm050237 not found in 104aa AT3G02790.1 not_1st 0.784403669 II
Pt015725 not found in 104aa AT3G02790.1 not_1st 0.770642201 II
Pt013059 not found in 114aa AT3G02790.1 not_1st 0.766055045 II
Pp008946 not found in 104aa AT3G02790.1 not_1st 0.729357798 II
Pp028557 not found in 104aa AT3G02790.1 not_1st 0.711009174 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G02790.1     MTGKAKPKKHTAKEIQAKIDAALTNRGGGKAGIADRTGKEKGGHAKYECPHCKITAPGLK
pp028557_Pp1s21 MTGKAKPKKHTAKEIAMKIDMATTNRGGGKAGVIDRKALDKGGHAKLACPICKATAPDVK
pt013059_POPTR_ MTGKAKPKKHTAKEIAAKVDAATTNRGGGKAGQADRTGQEKGGHAKYECPHCKITAPDLK
pp008946_Pp1s90 MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAGVVDRKALDKGGHAKLACPICKATAPDVK
gm050237_Glyma1 MTGKAKPKKHTAKEIAAKVDAATTNRGGGKAGLKDRSGLEKGGHAKYECPHCKVTAPDVK
pt015725_POPTR_ MTGKAKPKKHTAKELAAKLDAATTNRGGGKAGVADRTGQEKGGHAKYECPHCKTTAPDLK
                **************:  *:* * *********  **.. :******  ** ** ***.:*

AT3G02790.1     TMQIHHESKHPNIIYEESKLVNLHAVLAPVAESKPKPGIRGSLKK----------
pp028557_Pp1s21 SMSIHHEAKHPKLPWEEDKLINLHATAST-AEDKPKPGVRGSLKK----------
pt013059_POPTR_ TMQIHHDARHPKLPFEEDKLSNLHAVHVA-DSSKPRPGVKGSHKNNFGEGSSKSS
pp008946_Pp1s90 SMSIHHEAKHPKLPWEEDKLINLHATAST-AEDKPKPGVRGSLKK----------
gm050237_Glyma1 SMQIHHDARHPKIPFEEDKVVNLHATHVP-ESSKPRPGVRGSLKK----------
pt015725_POPTR_ SMQIHHDARHPKIPFEEDKLVNRHASSAA-DSSKSRPGVRGSLKK----------
                :*.***:::**:: :**.*: * **   .  ..*.:**::** *:
BoxShade v3.31 C (beta, 970507) Output
AT3G02790.1     M T G K A K P K K H T A K E I Q A K I D A A L T N R G G G K A G I A D R T G K E K G G H A K Y E C P H C K I T A P G L K
pp028557_Pp1s21    M T G K A K P K K H T A K E I A M K I D M A T T N R G G G K A G V I D R K A L D K G G H A K L A C P I C K A T A P D V K
pt013059_POPTR_    M T G K A K P K K H T A K E I A A K V D A A T T N R G G G K A G Q A D R T G Q E K G G H A K Y E C P H C K I T A P D L K
pp008946_Pp1s90    M T G K A K P K K H T A K E I A A K I D A A T T N R G G G K A G V V D R K A L D K G G H A K L A C P I C K A T A P D V K
gm050237_Glyma1    M T G K A K P K K H T A K E I A A K V D A A T T N R G G G K A G L K D R S G L E K G G H A K Y E C P H C K V T A P D V K
pt015725_POPTR_    M T G K A K P K K H T A K E L A A K L D A A T T N R G G G K A G V A D R T G Q E K G G H A K Y E C P H C K T T A P D L K
 
AT3G02790.1     T M Q I H H E S K H P N I I Y E E S K L V N L H A V L A P V A E S K P K P G I R G S L K K - - - - - - - - - -
pp028557_Pp1s21    S M S I H H E A K H P K L P W E E D K L I N L H A T A S T - A E D K P K P G V R G S L K K - - - - - - - - - -
pt013059_POPTR_    T M Q I H H D A R H P K L P F E E D K L S N L H A V H V A - D S S K P R P G V K G S H K N N F G E G S S K S S
pp008946_Pp1s90    S M S I H H E A K H P K L P W E E D K L I N L H A T A S T - A E D K P K P G V R G S L K K - - - - - - - - - -
gm050237_Glyma1    S M Q I H H D A R H P K I P F E E D K V V N L H A T H V P - E S S K P R P G V R G S L K K - - - - - - - - - -
pt015725_POPTR_    S M Q I H H D A R H P K I P F E E D K L V N R H A S S A A - D S S K S R P G V R G S L K K - - - - - - - - - -
 
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