fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G02790.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb034331 not found in 270aa AT3G02790.1 1st_1st 0.692660550 Ia
Gm025954 not found in 105aa AT3G02790.1 1st_1st 0.793577981 Ia
Pt013060 not found in 104aa AT3G02790.1 1st_1st 0.775229357 Ia
Pp024916 not found in 105aa AT3G02790.1 1st_1st 0.766055045 Ia
Sm012132 not found in 211aa AT3G02790.1 1st_1st 0.674311926 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (1 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G02790.1     ----------------------------------MTGKAKPK-----------KHTAKEI
gm025954_Glyma0 ----------------------------------MTGKAKPK-----------KHTAKEI
pp024916_Pp1s14 ----------------------------------MTGKAKPK-----------KHTAKEI
Sm012132_Selmo1 IHGQILVGDSLFFLQAMDASSFLMAPSHARLLFLLGGRLHPSVLVGNLLLLEWKLGVAGV
pt013060_POPTR_ ----------------------------------MTGKAKPK-----------KHTAKEI
Sb034331_Sorbi1 -RGR-------------------------RSRRSTRRRRSPR-----------RSTRRRR
                                                     :  *            :      

AT3G02790.1     QAKIDAALTNRGGGKAGIADRTGKEKGGHAKYECPHC-----------------------
gm025954_Glyma0 AAKVDAATTNRGGGKAGMKDRTGLEKGGHAKYECPHC-----------------------
pp024916_Pp1s14 QAKIDAATTNRGGGKAGVVDRKGLDKGGHAKLACPVC-----------------------
Sm012132_Selmo1 VVDLHALDIRRGG----LADWA--HELGMAALVRPQSV----------------------
pt013060_POPTR_ AAKVDAATTNRGGGKAGQADRTGQEKGGHAKYECPHC-----------------------
Sb034331_Sorbi1 TVAAARPGRRTGWGRTRAGTRS--WRARSAAPRRPTSSPCRSTTRRATPSSPSSRRSSST
                 .       . *             .   *    * .                       

AT3G02790.1     ---------------KITAPGLKTMQIHHE-----------------SKHPNIIYEESKL
gm025954_Glyma0 ---------------KVTAPDVKSMQIHHD-----------------ARHPKIPFEEDKV
pp024916_Pp1s14 ---------------KATAPDMKSMQIHHD-----------------AKHPKLPWEEDKL
Sm012132_Selmo1 ------------LEPRLSASSVGGGRVHLGRDLLGRVLLGLG----LASHPRLDSTCGLP
pt013060_POPTR_ ---------------KITAPDLKTMQIHHD-----------------ARHPKLPFEEDKL
Sb034331_Sorbi1 CTPPPQPPPPPPPPPRPPPPSPSPASAAASRSSLLSCLPAWGNSLRFQSHPSTRS----I
                               : ....                            **         

AT3G02790.1     VNLHAVLAPVAESKPKPGIRGSLKK---------------------
gm025954_Glyma0 VNLHATTSVPESSKPRPGVRGSLKK---------------------
pp024916_Pp1s14 INLHASTSVAAEEKPKPGVRGSLKK---------------------
Sm012132_Selmo1 INPIKSFAILYRSQARDTRD--------------------------
pt013060_POPTR_ SNLHA-VHVADSSKPRPGVKGSHKK---------------------
Sb034331_Sorbi1 INQTTDLWTLVRWPLPQSACGVLLVYCCFSLLYCWYMCYVIYVSTI
                 *
BoxShade v3.31 C (beta, 970507) Output
AT3G02790.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M T G K A K P K - - - - - - - - - - - K H T A K E I
gm025954_Glyma0    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M T G K A K P K - - - - - - - - - - - K H T A K E I
pp024916_Pp1s14    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M T G K A K P K - - - - - - - - - - - K H T A K E I
Sm012132_Selmo1    I H G Q I L V G D S L F F L Q A M D A S S F L M A P S H A R L L F L L G G R L H P S V L V G N L L L L E W K L G V A G V
pt013060_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M T G K A K P K - - - - - - - - - - - K H T A K E I
Sb034331_Sorbi1    - R G R - - - - - - - - - - - - - - - - - - - - - - - - - R S R R S T R R R R S P R - - - - - - - - - - - R S T R R R R
 
AT3G02790.1     Q A K I D A A L T N R G G G K A G I A D R T G K E K G G H A K Y E C P H C - - - - - - - - - - - - - - - - - - - - - - -
gm025954_Glyma0    A A K V D A A T T N R G G G K A G M K D R T G L E K G G H A K Y E C P H C - - - - - - - - - - - - - - - - - - - - - - -
pp024916_Pp1s14    Q A K I D A A T T N R G G G K A G V V D R K G L D K G G H A K L A C P V C - - - - - - - - - - - - - - - - - - - - - - -
Sm012132_Selmo1    V V D L H A L D I R R G G - - - - L A D W A - - H E L G M A A L V R P Q S V - - - - - - - - - - - - - - - - - - - - - -
pt013060_POPTR_    A A K V D A A T T N R G G G K A G Q A D R T G Q E K G G H A K Y E C P H C - - - - - - - - - - - - - - - - - - - - - - -
Sb034331_Sorbi1    T V A A A R P G R R T G W G R T R A G T R S - - W R A R S A A P R R P T S S P C R S T T R R A T P S S P S S R R S S S T
 
AT3G02790.1     - - - - - - - - - - - - - - - K I T A P G L K T M Q I H H E - - - - - - - - - - - - - - - - - S K H P N I I Y E E S K L
gm025954_Glyma0    - - - - - - - - - - - - - - - K V T A P D V K S M Q I H H D - - - - - - - - - - - - - - - - - A R H P K I P F E E D K V
pp024916_Pp1s14    - - - - - - - - - - - - - - - K A T A P D M K S M Q I H H D - - - - - - - - - - - - - - - - - A K H P K L P W E E D K L
Sm012132_Selmo1    - - - - - - - - - - - - L E P R L S A S S V G G G R V H L G R D L L G R V L L G L G - - - - L A S H P R L D S T C G L P
pt013060_POPTR_    - - - - - - - - - - - - - - - K I T A P D L K T M Q I H H D - - - - - - - - - - - - - - - - - A R H P K L P F E E D K L
Sb034331_Sorbi1    C T P P P Q P P P P P P P P P R P P P P S P S P A S A A A S R S S L L S C L P A W G N S L R F Q S H P S T R S - - - - I
 
AT3G02790.1     V N L H A V L A P V A E S K P K P G I R G S L K K - - - - - - - - - - - - - - - - - - - - -
gm025954_Glyma0    V N L H A T T S V P E S S K P R P G V R G S L K K - - - - - - - - - - - - - - - - - - - - -
pp024916_Pp1s14    I N L H A S T S V A A E E K P K P G V R G S L K K - - - - - - - - - - - - - - - - - - - - -
Sm012132_Selmo1    I N P I K S F A I L Y R S Q A R D T R D - - - - - - - - - - - - - - - - - - - - - - - - - -
pt013060_POPTR_    S N L H A - V H V A D S S K P R P G V K G S H K K - - - - - - - - - - - - - - - - - - - - -
Sb034331_Sorbi1    I N Q T T D L W T L V R W P L P Q S A C G V L L V Y C C F S L L Y C W Y M C Y V I Y V S T I
 
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