fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G02790.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt015725 not found in 104aa AT3G02790.1 not_1st 0.770642201 II
Pt013059 not found in 114aa AT3G02790.1 not_1st 0.766055045 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G02790.1     MTGKAKPKKHTAKEIQAKIDAALTNRGGGKAGIADRTGKEKGGHAKYECPHCKITAPGLK
pt015725_POPTR_ MTGKAKPKKHTAKELAAKLDAATTNRGGGKAGVADRTGQEKGGHAKYECPHCKTTAPDLK
pt013059_POPTR_ MTGKAKPKKHTAKEIAAKVDAATTNRGGGKAGQADRTGQEKGGHAKYECPHCKITAPDLK
                **************: **:*** ********* *****:************** ***.**

AT3G02790.1     TMQIHHESKHPNIIYEESKLVNLHAVLAPVAESKPKPGIRGSLKK----------
pt015725_POPTR_ SMQIHHDARHPKIPFEEDKLVNRHASSA-ADSSKSRPGVRGSLKK----------
pt013059_POPTR_ TMQIHHDARHPKLPFEEDKLSNLHAVHV-ADSSKPRPGVKGSHKNNFGEGSSKSS
                :*****:::**:: :**.** * **  . . .**.:**::** *:
BoxShade v3.31 C (beta, 970507) Output
AT3G02790.1     M T G K A K P K K H T A K E I Q A K I D A A L T N R G G G K A G I A D R T G K E K G G H A K Y E C P H C K I T A P G L K
pt015725_POPTR_    M T G K A K P K K H T A K E L A A K L D A A T T N R G G G K A G V A D R T G Q E K G G H A K Y E C P H C K T T A P D L K
pt013059_POPTR_    M T G K A K P K K H T A K E I A A K V D A A T T N R G G G K A G Q A D R T G Q E K G G H A K Y E C P H C K I T A P D L K
 
AT3G02790.1     T M Q I H H E S K H P N I I Y E E S K L V N L H A V L A P V A E S K P K P G I R G S L K K - - - - - - - - - -
pt015725_POPTR_    S M Q I H H D A R H P K I P F E E D K L V N R H A S S A - A D S S K S R P G V R G S L K K - - - - - - - - - -
pt013059_POPTR_    T M Q I H H D A R H P K L P F E E D K L S N L H A V H V - A D S S K P R P G V K G S H K N N F G E G S S K S S
 
0