fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G02790.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt013060 not found in 104aa AT3G02790.1 1st_1st 0.775229357 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G02790.1     MTGKAKPKKHTAKEIQAKIDAALTNRGGGKAGIADRTGKEKGGHAKYECPHCKITAPGLK
pt013060_POPTR_ MTGKAKPKKHTAKEIAAKVDAATTNRGGGKAGQADRTGQEKGGHAKYECPHCKITAPDLK
                *************** **:*** ********* *****:******************.**

AT3G02790.1     TMQIHHESKHPNIIYEESKLVNLHAVLAPVAE-SKPKPGIRGSLKK
pt013060_POPTR_ TMQIHHDARHPKLPFEEDKLSNLHAV--HVADSSKPRPGVKGSHKK
                ******:::**:: :**.** *****   **: ***:**::** **
BoxShade v3.31 C (beta, 970507) Output
AT3G02790.1     M T G K A K P K K H T A K E I Q A K I D A A L T N R G G G K A G I A D R T G K E K G G H A K Y E C P H C K I T A P G L K
pt013060_POPTR_    M T G K A K P K K H T A K E I A A K V D A A T T N R G G G K A G Q A D R T G Q E K G G H A K Y E C P H C K I T A P D L K
 
AT3G02790.1     T M Q I H H E S K H P N I I Y E E S K L V N L H A V L A P V A E - S K P K P G I R G S L K K
pt013060_POPTR_    T M Q I H H D A R H P K L P F E E D K L S N L H A V - - H V A D S S K P R P G V K G S H K K
 
0