fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G02790.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb034331 not found in 270aa AT3G02790.1 1st_1st 0.692660550 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G02790.1     --------MTGKAKPKKHTAKEIQAKIDAALTNRGGGKAGIADRTGKEKGGHAKYECPHC
Sb034331_Sorbi1 RGRRSRRSTRRRRSPRRSTRR--RRTVAAA---RPGRRTGWGRTRAGTRSWRARSAAPRR
                           : .*:: * :  : .: **   * * ::* .   .  :. :*:  .*: 

AT3G02790.1     KITAPGLKTMQIHHES--------------------------------------------
Sb034331_Sorbi1 PTSSPCRSTTRRATPSSPSSRRSSSTCTPPPQPPPPPPPPPRPPPPSPSPASAAASRSSL
                  ::*  .* :    *                                            

AT3G02790.1     --------------KHP---NIIYEESKLVNLHAVLAPVAESKPKPGIRGSLKK------
Sb034331_Sorbi1 LSCLPAWGNSLRFQSHPSTRSIINQTTDLWTL--VRWPLPQSAC-----GVLLVYCCFSL
                              .**   .** : :.* .*  *  *:.:*       * *        

AT3G02790.1     ---------------
Sb034331_Sorbi1 LYCWYMCYVIYVSTI
BoxShade v3.31 C (beta, 970507) Output
AT3G02790.1     - - - - - - - - M T G K A K P K K H T A K E I Q A K I D A A L T N R G G G K A G I A D R T G K E K G G H A K Y E C P H C
Sb034331_Sorbi1    R G R R S R R S T R R R R S P R R S T R R - - R R T V A A A - - - R P G R R T G W G R T R A G T R S W R A R S A A P R R
 
AT3G02790.1     K I T A P G L K T M Q I H H E S - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb034331_Sorbi1    P T S S P C R S T T R R A T P S S P S S R R S S S T C T P P P Q P P P P P P P P P R P P P P S P S P A S A A A S R S S L
 
AT3G02790.1     - - - - - - - - - - - - - - K H P - - - N I I Y E E S K L V N L H A V L A P V A E S K P K P G I R G S L K K - - - - - -
Sb034331_Sorbi1    L S C L P A W G N S L R F Q S H P S T R S I I N Q T T D L W T L - - V R W P L P Q S A C - - - - - G V L L V Y C C F S L
 
AT3G02790.1     - - - - - - - - - - - - - - -
Sb034331_Sorbi1    L Y C W Y M C Y V I Y V S T I
 
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