fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G02790.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm050237 not found in 104aa AT3G02790.1 not_1st 0.784403669 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G02790.1     MTGKAKPKKHTAKEIQAKIDAALTNRGGGKAGIADRTGKEKGGHAKYECPHCKITAPGLK
gm050237_Glyma1 MTGKAKPKKHTAKEIAAKVDAATTNRGGGKAGLKDRSGLEKGGHAKYECPHCKVTAPDVK
                *************** **:*** *********: **:* **************:***.:*

AT3G02790.1     TMQIHHESKHPNIIYEESKLVNLHAVLAPVAESKPKPGIRGSLKK
gm050237_Glyma1 SMQIHHDARHPKIPFEEDKVVNLHATHVP-ESSKPRPGVRGSLKK
                :*****:::**:* :**.*:*****. .*  .***:**:******
BoxShade v3.31 C (beta, 970507) Output
AT3G02790.1     M T G K A K P K K H T A K E I Q A K I D A A L T N R G G G K A G I A D R T G K E K G G H A K Y E C P H C K I T A P G L K
gm050237_Glyma1    M T G K A K P K K H T A K E I A A K V D A A T T N R G G G K A G L K D R S G L E K G G H A K Y E C P H C K V T A P D V K
 
AT3G02790.1     T M Q I H H E S K H P N I I Y E E S K L V N L H A V L A P V A E S K P K P G I R G S L K K
gm050237_Glyma1    S M Q I H H D A R H P K I P F E E D K V V N L H A T H V P - E S S K P R P G V R G S L K K
 
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